Vibrio syngnathi: K08M4_38850
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Entry
K08M4_38850 CDS
T09193
Symbol
rbsR_2
Name
(GenBank) Ribose operon repressor
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
vsy
Vibrio syngnathi
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vsy03000
]
K08M4_38850 (rbsR_2)
Transcription factors [BR:
vsy03000
]
Prokaryotic type
Helix-turn-helix
LacI family
K08M4_38850 (rbsR_2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_Tnp_ISL3
HTH_31
Motif
Other DBs
NCBI-ProteinID:
ARP40546
UniProt:
A0AA34XQJ5
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All DBs
Position
2:1046390..1047391
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AA seq
333 aa
AA seq
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MATMKDVARLAKVSTSTVSHVINKSRFVSEEIAERVNSAAKELNYAPSALARSLKMKQTK
TLGMLVTTSTNPFFGEVVKGVERRCYEKGYNLILCNTEGDSDRMKSSIDTLLQKRVDGLM
LMCSTLEGQHIDVFERYPELPVVVMDWGPMLFASDKIQDNSHQGGYMATKHLIDNGHSQI
GCITGPLHRNQASSRYQGFKQAMEEAKLEINPKWIVESNFECDGGFDSYHTLKTRGVMPS
AIFVSNDMMAMGVIHAAAQDGTSIPNDLSIIGYDDIHLSKYMTPALSTIHQPKHRLGKAA
VDTLLNRLKTPDAYPQVVELEPTLVERSSVKAI
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaatgaaagacgtcgctcggctagcaaaggtttctacttcaaccgtcagccat
gtgatcaacaagtcacgttttgtcagtgaagagattgctgagcgtgttaacagtgcggct
aaagaactcaactacgcaccgtctgcattggctcgcagcttgaaaatgaagcaaaccaaa
accttgggtatgctggttactacctctacaaacccattctttggcgaagtagtaaaaggt
gttgaacgtcgttgttatgagaaaggctacaaccttatcttgtgtaatacagaaggcgac
agcgaccgtatgaagtcatctatcgataccttgctacaaaagagagtcgatggcttgatg
ttgatgtgttcaacccttgaaggacagcatattgacgtatttgaacgctatccagaacta
cctgttgtggtcatggactggggcccaatgctgttcgcgagtgataagatccaagacaac
tcgcaccaaggtggctacatggcgaccaagcatttgatagacaacggccactctcagatt
ggttgtatcaccggcccacttcaccgcaatcaagcctcttctcgttatcaaggcttcaag
caagcaatggaagaagcaaagctagagatcaatcctaaatggattgttgaatccaacttc
gaatgcgatggcggctttgactcataccacacactaaagacccgaggcgtaatgccgtcg
gcaatcttcgtgagtaatgacatgatggcaatgggtgtgattcacgctgccgcacaagat
ggcacgtcgattccaaacgatctttcgatcattggttacgatgacatccacttatcgaag
tacatgacccctgctttgagcactatccaccagccaaagcaccgtttaggtaaagctgcg
gtagatactctcttgaaccgactcaaaacaccagatgcgtatccgcaagttgttgagtta
gaaccaacgttagttgaacgaagcagcgtcaaagccatttaa
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