Vibrio syngnathi: K08M4_40590
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Entry
K08M4_40590 CDS
T09193
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vsy
Vibrio syngnathi
Pathway
vsy03030
DNA replication
vsy03430
Mismatch repair
vsy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K08M4_40590
03430 Mismatch repair
K08M4_40590
03440 Homologous recombination
K08M4_40590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vsy03032
]
K08M4_40590
03400 DNA repair and recombination proteins [BR:
vsy03400
]
K08M4_40590
Enzymes [BR:
vsy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K08M4_40590
DNA replication proteins [BR:
vsy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K08M4_40590
DNA repair and recombination proteins [BR:
vsy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K08M4_40590
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ARP40720
UniProt:
A0AA34TTZ3
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All DBs
Position
2:1234792..1235415
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AA seq
207 aa
AA seq
DB search
MAPNSADSVIVLDFETTGLSPNMGDRAIEIGAVKLVNGEVVDTFQQLMNPGFRVSGFIES
YTGISNRMLSTAASCSEVMDEFADFIQGSQLVAHNASFDKRFLDAELDFIGRDYTGKFAC
SMLIARRLIQDAPTHKLGDLVRFKNIDNDGTFHRALADSEMTARLWLLMIDELQKNHGIQ
QPSFQLMQKISKTAKGSIPKLLMSNRG
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atggctccaaactccgcagactccgttatcgttctcgatttcgaaaccacaggcttatca
ccaaacatgggtgaccgagcgatcgaaatcggtgcggttaaattagttaacggcgaagtc
gtcgacaccttccagcaactcatgaacccaggatttcgtgttagcgggttcattgaaagc
tatactgggatcagtaaccgtatgttaagcacggcggccagttgcagtgaagtaatggat
gagtttgcagactttatccaaggcagccagcttgttgctcacaatgcatcgtttgataag
cgctttcttgatgcggaattagactttattggcagagactacacaggcaagttcgcttgc
tcaatgttgattgctcgccgtctcatccaagacgcaccgactcataagctaggcgacctt
gtgcgttttaaaaatatcgacaacgacggtactttccacagagcgttagccgattcagaa
atgacagcacggttatggttattgatgattgatgagcttcaaaagaaccacggcattcaa
cagccgagctttcaactgatgcagaaaatatctaagacggcaaaaggctcgattccaaag
ctgctgatgagcaacagaggctaa
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