Vibrio syngnathi: K08M4_40620
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Entry
K08M4_40620 CDS
T09193
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
vsy
Vibrio syngnathi
Brite
KEGG Orthology (KO) [BR:
vsy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vsy03009
]
K08M4_40620
Enzymes [BR:
vsy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
K08M4_40620
Ribosome biogenesis [BR:
vsy03009
]
Prokaryotic type
rRNA helicases
K08M4_40620
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_30
Helicase_C_2
AAA_19
UvrA_inter
CMS1
Motif
Other DBs
NCBI-ProteinID:
ARP40723
UniProt:
A0AA34TUP7
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All DBs
Position
2:complement(1236898..1238277)
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AA seq
459 aa
AA seq
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MSTSKFSSIALKPELLNTLDSLGYTEMTPIQALSLPTILDGKDVIGQGKTGSGKTAAFGL
GVLQNLRVKRFRVQSLVLCPTRELADQVAKEIRTLARGIHNIKVLTLCGGMPMGPQIGSL
EHGAHILVGTPGRILDHLERDRIDLSGLNTLVLDEADRMLEMGFQDALDAVIEAAPKDRQ
TLLFSATFPKQIKSVADRIMNNPEMVKVESTHDHSSIQQHFYKVEGTEARDDALELMLLH
HQPESAVVFCNTKKEVQNVNDELSHRGFSVIELHGDMEQRERDQALVQFSNKTISILVAT
DVAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSKGVAISFFSEKEMHRVAQIDE
YMDMPIEPSQLPAKPIAKPYYSNMVTIQIDGGKKAKLRAGDILGALTGQGGIDGKSVGKI
NLFAMRAYVAVERSMAKKALGKIESGKMKGRQFRARILK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
ttgagcacttcaaaattctcttcaatcgcccttaagccagagcttctaaatacgttagat
tctcttggttatactgaaatgacgcctattcaagcgttaagtcttcctactattctggat
ggcaaggatgttatcggtcagggtaaaacgggttcaggtaaaacagctgcctttggttta
ggcgtgctgcaaaacctacgcgttaagcgttttcgtgttcagtctttagtgttatgtccg
actcgtgagcttgcagaccaagtagcaaaagagatccgtactcttgctcgtggcattcac
aatattaaagtgctgacactatgtggcggtatgccaatgggcccacaaattggttcatta
gagcatggcgcacacattctagtgggcactcctggtcgtattttggaccacctagagaga
gatcgtattgacctgtctgggttgaacacacttgtgttagatgaagccgatcgcatgctg
gaaatgggtttccaagatgcactagatgctgttattgaagcagcaccaaaagatcgtcaa
acattattgttcagtgcaactttccctaaacagattaaatctgttgcagaccgcatcatg
aataaccctgaaatggtgaaggttgaatcaacgcacgatcactcaagcatccagcaacac
ttttataaggttgaaggtactgaagctcgtgatgacgcactagagctaatgcttcttcat
catcaaccagagtcagcggttgtgttctgtaatactaagaaagaagttcagaacgtaaat
gatgagctaagccaccgtggtttcagtgttatcgagcttcatggcgacatggaacagcgt
gaacgtgaccaagctttggttcagttctctaacaaaactatctctatcttggttgcaaca
gatgttgccgctcgtggtcttgatgttgataacctagatgctgtgttcaactttgaattg
tctcgcgaccctgaagtacacgtgcaccgcatcggtcgtactggtcgtgcaggaagcaaa
ggtgtcgcaattagcttctttagcgaaaaagagatgcaccgtgttgctcaaattgatgag
tacatggatatgccaatcgaaccgtctcagttaccagctaaaccaattgctaagccgtac
tactcaaacatggtaactatccaaattgatggtggtaagaaggctaaacttcgtgcaggt
gatattcttggtgcgttgacaggccaaggcggtattgatggtaaatcagtaggtaagatc
aacttgttcgcgatgcgtgcttacgttgctgtagaaagatcaatggctaagaaagcatta
ggaaaaatcgaatcaggtaagatgaaggggcgtcaattccgcgcccgaattctgaaataa
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