Vibrio tapetis subsp. tapetis: A0259
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Entry
A0259 CDS
T05424
Symbol
lpd
Name
(GenBank) lipoamide dehydrogenase, E3 component is part of three enzyme complexes
KO
K00382
dihydrolipoyl dehydrogenase [EC:
1.8.1.4
]
Organism
vta
Vibrio tapetis subsp. tapetis
Pathway
vta00010
Glycolysis / Gluconeogenesis
vta00020
Citrate cycle (TCA cycle)
vta00260
Glycine, serine and threonine metabolism
vta00280
Valine, leucine and isoleucine degradation
vta00310
Lysine degradation
vta00380
Tryptophan metabolism
vta00620
Pyruvate metabolism
vta00630
Glyoxylate and dicarboxylate metabolism
vta00640
Propanoate metabolism
vta00670
One carbon pool by folate
vta00785
Lipoic acid metabolism
vta01100
Metabolic pathways
vta01110
Biosynthesis of secondary metabolites
vta01120
Microbial metabolism in diverse environments
vta01200
Carbon metabolism
vta01210
2-Oxocarboxylic acid metabolism
vta01240
Biosynthesis of cofactors
Module
vta_M00009
Citrate cycle (TCA cycle, Krebs cycle)
vta_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
vta_M00307
Pyruvate oxidation, pyruvate => acetyl-CoA
vta_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
vta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
A0259 (lpd)
00020 Citrate cycle (TCA cycle)
A0259 (lpd)
00620 Pyruvate metabolism
A0259 (lpd)
00630 Glyoxylate and dicarboxylate metabolism
A0259 (lpd)
00640 Propanoate metabolism
A0259 (lpd)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
A0259 (lpd)
00280 Valine, leucine and isoleucine degradation
A0259 (lpd)
00310 Lysine degradation
A0259 (lpd)
00380 Tryptophan metabolism
A0259 (lpd)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
A0259 (lpd)
00670 One carbon pool by folate
A0259 (lpd)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vta04147
]
A0259 (lpd)
Enzymes [BR:
vta01000
]
1. Oxidoreductases
1.8 Acting on a sulfur group of donors
1.8.1 With NAD+ or NADP+ as acceptor
1.8.1.4 dihydrolipoyl dehydrogenase
A0259 (lpd)
Exosome [BR:
vta04147
]
Exosomal proteins
Exosomal proteins of breast cancer cells
A0259 (lpd)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Pyr_redox_dim
Pyr_redox
FAD_oxidored
Pyr_redox_3
GIDA
AlaDh_PNT_C
HI0933_like
FAD_binding_2
NAD_binding_8
FAD_binding_3
Thi4
DAO
Motif
Other DBs
NCBI-ProteinID:
SON48238
UniProt:
A0A2N8Z8I0
LinkDB
All DBs
Position
A:275034..276461
Genome browser
AA seq
475 aa
AA seq
DB search
MSKEIKAQVVVLGSGPAGYSAAFRCADLGLETVLVERYSTLGGVCLNVGCIPSKALLHVA
KVIEEAKAMAEHGVVFGEPQTDINKVRIWKDKVVNQLTGGLGGMAKMRNVTVVNGFGKFT
GPNTLLVEGEGEATTVNFDNAIIAAGSRPIKLPFIPHEDPRIWDSTDALELNEVPEKLLI
MGGGIIGLEMGTVYHSLGSKVEVVEMFDQVIPAADKDIVKVYTKRIKDKFKLMLQTKVTA
VEAKEDGIYVSMEGKKAPAEAERYDAVLVAIGRVPNGALIDAEKAGIEVDERGFINVDKQ
MRTNVPHIHAIGDVVGQPMLAHKGVHEGHVAAEVISGKKHYFDPKVIPSIAYTEPEVAWV
GKTEREAKDEGIKYEVATFPWAASGRAIASDCADGMTKLIFDKETHRVIGGAIVGTNGGE
LLGEIGLAIEMGCDAEDIALTIHAHPTLHESVGLAAEVFEGSITDLPNKKAVKRK
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagaaattaaagcccaagttgttgtacttggttcaggtcctgctggatactca
gctgcattccgttgtgcagacctaggtttagaaactgtattagttgaacgttacagcacg
ctaggtggtgtatgtttgaatgttggttgtatcccatctaaagctctgcttcacgttgca
aaagtgatcgaagaagcaaaagcgatggctgaacacggcgttgtatttggtgagcctcaa
acggacatcaacaaagttcgtatctggaaagacaaagttgttaaccaactgactggcggt
cttggcggaatggctaagatgcgtaacgtgacggttgttaacggtttcggtaaatttact
ggccctaatactttgcttgttgaaggcgaaggcgaagcaacgacagttaacttcgacaat
gcgatcattgctgcgggttctcgtccaattaaactgccatttatcccgcatgaagatcca
cgcatttgggattcaacagacgcactagagctaaacgaagtaccagaaaaactgcttatt
atgggcggtggtattatcggtctagaaatgggtactgtgtaccactctctaggttctaaa
gttgaagttgttgagatgttcgatcaagttatccctgctgcggataaagacatcgttaaa
gtttacactaagcgcatcaaagacaagtttaagctaatgcttcaaactaaagttactgca
gttgaagcgaaagaagacggtatctacgtttcaatggaaggcaaaaaagcaccagcagaa
gctgaacgctacgatgccgttcttgttgctatcggccgtgttccaaacggtgcacttatc
gacgctgaaaaagcgggtatcgaagttgatgagcgtggcttcatcaatgttgataagcaa
atgcgtactaacgttcctcacattcacgcaattggtgatgttgtaggtcaacctatgctt
gctcacaaaggtgtgcatgaaggccacgttgctgctgaagttatttcaggtaagaagcac
tactttgatcctaaagtaattccatctattgcgtacacggaaccagaagtcgcgtgggtt
ggtaaaactgagcgtgaagcgaaagacgaaggcattaagtacgaagttgcaacattccca
tgggctgcttcaggccgtgctatcgcatcagactgtgctgatggtatgactaagcttatc
tttgataaagaaactcatcgtgttattggtggtgctatcgttggtactaacggtggtgag
ctactaggtgagatcggtcttgctatcgagatgggttgtgatgcagaagacatcgcgctg
actattcatgctcacccaacgttgcatgaatcagtaggccttgctgctgaagtatttgag
ggttcaattactgaccttccaaataagaaagcagtaaaaagaaagtaa
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