Vibrio tapetis subsp. tapetis: A0270
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Entry
A0270 CDS
T05424
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
vta
Vibrio tapetis subsp. tapetis
Pathway
vta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A0270 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vta03019
]
A0270 (pcnB)
Enzymes [BR:
vta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
A0270 (pcnB)
Messenger RNA biogenesis [BR:
vta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
A0270 (pcnB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_arg_C
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
SON48249
UniProt:
A0A2N8Z8K2
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Position
A:complement(285787..287019)
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AA seq
410 aa
AA seq
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MLYRLHNAGFDAFLVGGGVRDLLLGEQPKDFDIATNATPEEVKQLFRNCRLIGRRFRLAH
IMFGRDIIEVATFRGHHQEPAKHVSAQSKEGMLLRDNVYGSVDEDAERRDFTINAMYYNI
ADYSIHDYAGGVKDLNDRVIRLIGDPETRYREDPVRMLRAARFAAKLDMEICEKTAAPIV
ELSPLLRDIPSARLFEESLKLLQSGHGLNTYYLMRELNLFQQLFPQLEQDFTQAQDSHAE
RMIELALASTDKRIKEGKRINPAFMFAAFLWYPLNRVAQQLMEERNFNHYDAIMEASNIV
LDTQVKSIAIPRRHTATVREIWQLQLRLPRRSGKRASRLLELNKFRAGFDFLEMRGEIEQ
GDTLELANWWATYQEAGRNMRQAMVTDLGDSSTGHRRKRNYRNKKRKPQS
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
gtgctctacagactgcataatgctgggttcgatgcgttcctagtaggtggtggtgtgcgc
gatctcttacttggtgaacaaccaaaagatttcgacattgcaaccaatgcaactccggaa
gaagtgaaacaacttttccgtaattgccgtctgattggtcgtcgcttccgtttggctcat
atcatgtttggtcgtgatattattgaagtcgctacgttccgtggccaccatcaagagccg
gcaaaacacgtttctgctcagtctaaagaaggcatgttgttgcgagacaacgtctacggc
agcgtcgatgaagacgccgaacgtcgtgacttcacgatcaatgccatgtattacaacatc
gcggattacagtatccacgattacgctggcggtgttaaagacctcaacgatcgcgtcatt
cgcttgatcggagatccagaaacccgctatcgcgaagatccagtgcgcatgcttcgagct
gcaaggtttgccgccaagcttgatatggaaatttgtgaaaaaacagccgcgccgattgta
gagctatcacctcttttacgtgatatcccttctgctcgattatttgaagagtcgttaaaa
ctacttcaatcaggccatgggcttaatacttattacttgatgcgtgaattgaacttgttt
caacagcttttcccgcaacttgaacaagatttcacccaagcacaagactctcatgcagag
cgcatgattgagcttgcactggcttcgacagataaacgcattaaagaaggcaagcgtatt
aaccctgctttcatgtttgcagctttcttgtggtatccgcttaaccgtgtcgcgcaacaa
ttaatggaagagcgtaacttcaaccactacgacgccattatggaagcgagtaatatcgtt
ctcgatacacaagtgaagtctatcgcgatccctcgtcgccatactgcaaccgttcgcgaa
atttggcagctgcagctccgtctacctcgccgtagcggaaaacgagcatctcgattacta
gagcttaacaagtttagagccggttttgatttcttagaaatgcgtggtgaaattgagcaa
ggtgataccctagagcttgctaattggtgggcaacttaccaagaagctggacgtaatatg
cgtcaagctatggtgaccgacttaggggattcatccacaggtcaccgacgtaagcgcaac
taccgtaataaaaagagaaaaccacagtcatga
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