Vibrio tapetis subsp. tapetis: A0411
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Entry
A0411 CDS
T05424
Symbol
gyrA
Name
(GenBank) DNA gyrase (type II topoisomerase), subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vta
Vibrio tapetis subsp. tapetis
Brite
KEGG Orthology (KO) [BR:
vta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vta03032
]
A0411 (gyrA)
03400 DNA repair and recombination proteins [BR:
vta03400
]
A0411 (gyrA)
Enzymes [BR:
vta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
A0411 (gyrA)
DNA replication proteins [BR:
vta03032
]
Prokaryotic type
DNA Topoisomerases
A0411 (gyrA)
DNA repair and recombination proteins [BR:
vta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
A0411 (gyrA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
DUF6674
Motif
Other DBs
NCBI-ProteinID:
SON48390
UniProt:
A0A2N8Z919
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Position
A:433991..436648
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AA seq
885 aa
AA seq
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MSDLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KSYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLVNGASGIAVGMAT
NIPPHNLGEVVDGCLAFINNEDITIDELMDYIPGPDFPTAAMISGRKGIVDAYKTGRGKV
YMRAKANIEADKNGKETIIVTEIPYQVNKARLIEKVAELVKDKKVEGISALRDESDKDGM
RIVIECKRDAVGEVVLNNLYSQTQLQTTFGVNMVALDNGQPKLFNLKEMLKCFVDHRREV
VTRRTIFELKKARDRAHILEALALALANIDEIIALIKNAATPAEAKEGLVARGWDLGNVA
SMLERAGTDAARPDWLEDQFGIRDGQYFLTETQAQAILELRLHRLTGLEHEKILDEYKAL
LEEIAELMHILASTERLMEVIREELEAVRDGFADARRTEITAAMHDIDMEDLITQEDVVV
TLSREGYVKYQILSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILCFSTRGKTYR
LKVYQLPQASRTARGKPIVNILPLEENERITAILPVSEFSSDKYIFMATGDGTVKKTSLD
QFANVRANGLIAVNLRDDDSLIGVDITNGENDIMLFSKSGKVVRFAEDKVRAMGRTASGV
RGMKLPEDDQVVSLIVPANEGDILTVTNNGYGKRTTLAEYPTKGRATQGVVSIKVSDRNG
PVVGAVQVEDGDEFMMITDAGTLVRTRVSEVSQVGRNTLGVTLIRTAEDESVVALQRIDE
IEEAELAEGEELQEGEEPSSEQPSAESSESTDSTDAPKADDANEE
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatctagctaaagagatcacgcccgtaaacattgaagatgagcttagaagttca
tatttagactacgcgatgtctgtaatcgtgggtcgtgctcttccagatgtgcgtgatggc
cttaagcctgtacaccgccgcgttttattcgcgatgaatgtgctaggtaatgattggaat
aaatcatataaaaaatctgcccgtgtagtgggcgacgtaatcggtaaatatcacccgcat
ggtgatagcgctgtttacgacactattgtacgtatggcgcaaccattctcgcttcgttac
atgttggtcgatggccaaggtaactttggttcgatcgatggtgattctgccgcggcaatg
cgttataccgaagtacgtatgtctaaaattgctcatgaactattagcagacctagacaaa
gaaacggttgactatgtacctaactatgatggtacagagcaaatcccggccgtgcttcca
acaaaaattcctaacctattggttaacggtgcttctggtatcgcagtaggtatggcaacc
aacatcccaccgcataacttaggtgaagttgtcgatggttgtttggcattcatcaataat
gaagacatcactattgatgagctaatggattacattccgggcccagatttcccaactgca
gcaatgatcagtggccgtaaaggcattgtcgatgcttataagacgggccgcggcaaggtc
tatatgcgcgcaaaagcgaatatagaagcagacaaaaatggcaaagaaaccatcattgtc
acggaaatcccataccaagttaacaaagctcgtttgattgaaaaagttgccgagctagta
aaagacaagaaagtagagggcatcagtgctctacgtgatgagtctgataaagacggtatg
cgcattgttatcgaatgtaagcgtgatgcagtaggtgaagtggttctaaacaacctttac
tcacaaactcagcttcaaacgacattcggcgttaacatggttgcacttgataacggccaa
ccaaaactgttcaacttaaaagaaatgttgaagtgttttgttgatcaccgtcgtgaagtt
gtcactcgtcgtaccatcttcgaattgaagaaagcacgtgaccgcgctcatatccttgaa
gcgttagcacttgcacttgcgaacattgatgaaatcattgctcttatcaagaacgcagca
acacctgcagaagcaaaagaaggcctagtcgctcgcggttgggacttaggtaatgttgct
tcaatgctagaacgtgctggtactgatgcggctcgtcctgattggctagaagaccaattt
ggtatccgtgacggtcagtacttcttaactgaaacacaagcacaagcgattcttgagctg
cgtctacaccgtttaaccggtttagagcatgaaaaaattcttgatgaatacaaagcgctt
ctagaagaaattgcagaacttatgcacattcttgcaagcactgagcgtttgatggaagtc
attcgtgaagagcttgaagccgtacgtgatggttttgctgacgcacgccgtaccgaaatc
acagcagcaatgcatgatatcgatatggaagacttgatcactcaagaagatgttgttgtt
acgctttctcgcgaaggttacgttaagtaccaaatcctaagcgattacgaagcacaacgt
cgtggtggtaaaggtaagagcgcaaccaagatgaaagaagaagactacattgaacgtctt
cttgttgcgaatacgcacgataacatcttgtgtttctcgactcgtggtaaaacataccga
cttaaagtttatcaattgcctcaagcgagccgtactgctcgtggtaagccaattgtgaac
attcttccattggaagaaaacgaacgtattaccgcaattctacctgtttctgagtttagc
tctgacaagtatattttcatggctactggtgacggtacagttaagaaaacatcgcttgat
cagtttgctaacgtacgtgctaacggcttaatcgcggttaacctacgtgatgatgattca
ttaattggtgttgatattaccaatggcgaaaacgacattatgttgttctcgaaatcaggt
aaagttgttcgtttcgccgaagataaagtacgtgcaatgggacgtaccgcatcgggtgtt
cgtggcatgaagttaccagaagacgatcaagtggtttcactgattgttcctgctaacgaa
ggcgacatcttgacagtaacaaacaacggctacggtaaacgtacgacgcttgctgaatac
ccaaccaaaggtcgtgcgactcaaggtgtggtatccattaaagtgtcggatcgtaatggc
ccggttgttggcgctgttcaagttgaagacggcgatgagttcatgatgattaccgatgcc
ggtacgctagttcgtactcgtgtttcggaagttagccaagtgggtcgtaataccctaggc
gtgacgcttatccgtacagctgaagacgaaagtgttgttgcattgcagcgcatcgatgaa
atcgaagaagcagaattagcagaaggtgaagaactgcaagaaggcgaagagcctagcagt
gaacaaccaagcgctgaatcttcagagtcgaccgattcaactgacgcccctaaagctgac
gacgcaaacgaagaataa
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