Vibrio tapetis subsp. tapetis: A0510
Help
Entry
A0510 CDS
T05424
Symbol
rhlE
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
vta
Vibrio tapetis subsp. tapetis
Pathway
vta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A0510 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vta03019
]
A0510 (rhlE)
Enzymes [BR:
vta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A0510 (rhlE)
Messenger RNA biogenesis [BR:
vta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A0510 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
P-loop_SecA
AAA_19
UTP25_NTPase-like
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
SON48489
UniProt:
A0A2N8Z999
LinkDB
All DBs
Position
A:521383..522870
Genome browser
AA seq
495 aa
AA seq
DB search
MSFSSLGLCPSILKAIEEQGYDKPSPIQEKAIPAVISGQDVMAAAQTGTGKTAGFTLPIL
ERLAKGQRAKSNHVRALVLTPTRELAAQVNGSVVKYGKYLNLSSNVIFGGVKANPQMMKL
RQGSDVLVATPGRLMDLHQQNAVKFSQVEVLVLDEADRMLDMGFIRDIRKILNLLPKNRQ
NLLFSATFSDSIRELAKGLVKNPVEISVSPRNATAKTVEQFIYPVDKKRKAPALARLVKD
NNWQQVLVFSRTKHGANKLSKFLDDEGISSSAIHGNKSQGARIKALEGFKNGDVRVLVAT
DIAARGLDIPQLPQVVNFDLPNIAEDYVHRIGRTGRAGESGKAYSLVCADEADDLFGIER
LIQKLIPRVELEGFTPVNTLPESRLNSRPVKAKKPKRDHSRNDHQDGQRSGEARRGHKPA
GKNKRHFGHNASQSSGNSKEGGEATSSDHKNNGSNFKKSPKPAGQGKPRSGNKPSGNGNG
QQRRRKPQQNAKPAQ
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgagtttttcctctttggggctatgcccatctatcctgaaagcaattgaagaacaaggc
tatgataagccgtcgccgatccaagaaaaggcgatccctgcagtaatttcaggtcaagat
gtcatggcagctgcgcaaacaggtacgggtaaaactgccggttttacattgccgatacta
gagcgtttagcaaaaggccagagagcaaaaagcaatcatgttcgtgctttggtattaaca
ccaactcgtgaactagcggctcaagtaaatggcagtgttgtaaaatacggtaaatatcta
aacctaagttcaaacgttatttttggtggcgtaaaagcgaacccacaaatgatgaaactg
cgtcaaggttcagatgtattggttgcaacgccgggccgtttgatggatctgcatcagcaa
aatgcggttaagttttctcaagtagaagtgttggttctagatgaagccgaccgtatgctt
gatatgggtttcattcgcgatattcgcaaaatccttaacttgctaccaaagaatcgtcaa
aacttgctgttctcagcgacgttttcagacagcattcgtgaactggctaaaggcttggtt
aagaacccggttgaaatttcagttagcccgcgtaacgcaacagcaaaaaccgttgagcag
tttatctacccagtagacaaaaaacgtaaagctccggctttggctcgtttagtgaaagac
aataactggcaacaagtgctggtattctctagaacaaaacacggtgccaataaactgagt
aaatttttagatgacgaaggtatttcatcttctgcaattcacggtaataagagccaaggc
gcacgtattaaagcgttagaaggctttaagaatggcgatgttcgtgttcttgttgcaacc
gatattgcagcgcgtggtcttgatattccacaacttccgcaagtggttaacttcgattta
ccaaacattgcagaagactacgtacaccgtattggacgtaccggccgtgctggtgagtct
ggtaaagcgtattctttagtgtgtgctgatgaagccgatgacttgtttggtattgagcgc
ttaattcaaaagctgatcccacgtgttgaactggaaggttttacgccagttaatacactg
ccagagtcgcgtttgaatagccgtccagtcaaagcgaaaaagccgaagagagatcattca
agaaatgatcatcaagatggtcaacgttctggtgaagcaagacgcggtcataaacctgcg
ggcaaaaataagcgacactttggtcacaatgctagccaatcttctggtaactcaaaagaa
ggtggtgaagcaacgtcaagtgatcacaagaataacggcagcaactttaaaaaatcgcca
aagccggcaggccaaggtaaaccacgttcaggtaataagcctagtggaaatggtaatggc
caacagcgtcgccgtaagccacagcaaaatgcgaagccagctcagtaa
DBGET
integrated database retrieval system
