Vibrio tapetis subsp. tapetis: A0855
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Entry
A0855 CDS
T05424
Name
(GenBank) putative DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vta
Vibrio tapetis subsp. tapetis
Pathway
vta03030
DNA replication
vta03430
Mismatch repair
vta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A0855
03430 Mismatch repair
A0855
03440 Homologous recombination
A0855
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vta03032
]
A0855
03400 DNA repair and recombination proteins [BR:
vta03400
]
A0855
Enzymes [BR:
vta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A0855
DNA replication proteins [BR:
vta03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A0855
DNA repair and recombination proteins [BR:
vta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A0855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
SON48834
UniProt:
A0A2N8ZA94
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All DBs
Position
A:895709..896428
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AA seq
239 aa
AA seq
DB search
MLNKLFGKNKNDWTKVFAEKASSVRDERLKSFYETGVVSEETPLSQVPFVALDFETTGLD
AQSDDIVSIGLVPFSLNRIYCNQARHWIVNPTTPLAEESVVIHGITHNDIVDAPDLRRIL
DEVLEALSGKIVVVHYRKIEREFMDSALKERIGEGIVFPVMDTMEIEAQVQEKWAGGLMN
RLKGVKPQSIRLGSSRTRYGLPAYTPHHALTDALATAELLQAQLMHHYSADTPIKDVWL
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgttgaataaactatttggtaaaaataagaacgattggaccaaggtatttgctgagaag
gcaagctcggtaagagatgagcgcttaaagagcttttacgagacaggggttgtttcagaa
gaaacgcctttatcgcaagtccccttcgtagcactcgattttgaaacaacgggattagac
gcgcaaagtgacgacatagtgagtattggccttgtacctttttctctgaaccggatctac
tgcaaccaagctcggcattggatagtcaacccaaccaccccgctcgcagaagagtcagtg
gttattcatggtatcactcataacgatattgttgatgctccggatttaaggcgaattctt
gatgaagtgctagaggctttgtctggcaagattgtcgttgttcattatcgaaaaattgaa
cgagaattcatggatagcgctctaaaagaacgtataggtgaaggtattgtatttccggta
atggataccatggaaatcgaagcccaagtccaagaaaaatgggctgggggtttaatgaat
cgccttaaaggcgttaaaccgcagtcaatccgattaggctctagcagaacgcgctatggc
ctgcccgcttatactccacaccacgctttaaccgatgcactagccactgctgaactgtta
caagcgcagttgatgcaccactattctgccgacacaccaatcaaagatgtatggctatag
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