Vibrio tapetis subsp. tapetis: A1018
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Entry
A1018 CDS
T05424
Symbol
ruvB
Name
(GenBank) holliday junction helicase, subunit B
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
vta
Vibrio tapetis subsp. tapetis
Pathway
vta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A1018 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vta03400
]
A1018 (ruvB)
Enzymes [BR:
vta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A1018 (ruvB)
DNA repair and recombination proteins [BR:
vta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A1018 (ruvB)
RecFOR pathway proteins
A1018 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_14
AAA_22
nSTAND3
AAA_3
AAA_16
Rad17
NTPase_1
AAA_18
Bac_DnaA
RNA_helicase
ABC_tran
NB-ARC
AAA_2
Sigma54_activ_2
AAA_17
AAA_24
TIP49
NPHP3_N
AAA_28
bpMoxR
ATP-synt_ab
TsaE
AAA_PrkA
Motif
Other DBs
NCBI-ProteinID:
SON48997
UniProt:
A0A2N8ZAU0
LinkDB
All DBs
Position
A:complement(1075335..1076345)
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AA seq
336 aa
AA seq
DB search
MIEADRLIAPDNPVFKEEDIDVIDRAIRPKKLEDYRGQDHVRGQMEIFIKAAQLRSEALD
HLLIFGPPGLGKTTLANIVANEMEVNIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIH
RLSPVVEEVLYPAMEDYQLDIMIGEGPAARSIKIDLPPFTLIGATTRAGSLTSPLRDRFG
IVQRLEYYNVEDLQHIVKRSADCLGLSMESDGALEVARRSRGTPRIANRLLRRVRDYAEV
KGNGHICNDIADKALNMLDVDSQGLDYMDRKLLLAIMEKFSGGPVGLDNLAAAIGEEKDT
IEDVIEPYLIQQGYLQRTPRGRIATDRAYLHFGLDK
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatcgaagcagatcgattgatagcgccggacaacccggtatttaaagaagaagacata
gacgtaatagatcgtgctattcgtcctaaaaagttggaagactatcgaggacaagatcat
gttcgtgggcaaatggaaatctttatcaaagccgcacaacttcgaagtgaagctttagat
caccttctgattttcggccctccaggtttgggtaaaaccacgctcgctaatattgtagcc
aatgaaatggaagtgaatattcgcaccacttctggtcctgtgttggagaaagcaggggat
ctagcggcattactgaccaaccttgaagaaaacgacgtcttgtttattgatgagatacat
cgattaagtccagttgttgaagaagtcttatacccagcaatggaagattatcagttggac
attatgataggtgaagggcctgcggcacgttctattaaaatagatttgcctccgtttacc
ttgattggcgcaacaacgcgtgctggttcattgacttctccgcttcgtgaccgctttggt
atagttcagcgccttgaatactacaacgtagaagatttgcagcacatagtgaaaagaagc
gccgactgcctgggtttatctatggaatctgacggagcccttgaagttgctcgtcgctct
agaggtacccctcgtattgctaaccgattactaagacgcgtgcgagattatgcagaagta
aaaggtaatggtcatatctgcaacgacattgcagataaagctctgaatatgcttgatgtc
gatagccaagggctagactacatggatagaaaattgctactcgctattatggaaaaattc
agcggtggaccagtagggttagataacttagcagcagctatcggtgaagagaaagacacc
atcgaggatgtgattgagccttatctcattcagcagggttatttacaaagaacaccaaga
ggtcgaatagcgacagatcgcgcctatttgcattttggtttagataaataa
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