Vibrio tapetis subsp. tapetis: A1226
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Entry
A1226 CDS
T05424
Symbol
uvrB
Name
(GenBank) excinulease of nucleotide excision repair, DNA damage recognition component
KO
K03702
excinuclease ABC subunit B
Organism
vta
Vibrio tapetis subsp. tapetis
Pathway
vta03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A1226 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vta03400
]
A1226 (uvrB)
DNA repair and recombination proteins [BR:
vta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A1226 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
A1226 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
SON49205
UniProt:
A0A2N8ZBB7
LinkDB
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Position
A:complement(1301607..1303637)
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AA seq
676 aa
AA seq
DB search
MSKQFELVSKYQPAGDQPTAIAQLLDGLESGLAHQTLLGVTGSGKTFTLANVIAQSQRPA
ILLAPNKTLAAQLYGEMKAFFPNNSVEYFVSYYDYYQPEAYVPTTDTFIEKDSSVNAHIE
QMRLSATKALLERKDSIIVASVSAIYGLGDPDSYLKMMLHVSRGDVINQRDVLRRLAELQ
YSRNDVTFERGQFRVRGEVIDIFPAESDQNAVRIELFDDEVECISLFDPLTGAIVQRDLP
RYTIYPKTHYVTPRERMLEAIEKIKVELESRKKHLLDNNKLLEEQRISQRTQFDIEMMNE
LGFCSGVENYSRYLSGRGEGEAPPTLFDYLPSDGLLIIDESHVTVSQVGAMYKGDRSRKE
TLVEFGFRLPSALDNRPLKFDEFESIAPQTIYVSATPGNYEIEKSDGEVAEQVVRPTGLL
DPELEVRPVATQVDDLLSEIRKRSQVNERVLVTTLTKRMAEDLTEYLDEHGVRVRYLHSD
IDTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTI
GRAARNLSGKAILYGDKITKSMKKAMDETNRRREKQQAHNEQQGIVPQALKTCVQDIMEI
GDIAKTKNRKTASHVPLSKVAEASNSYEVMSPQELEKAMTKLENEMYSHAQNLEFEQAAD
KRDQLEKLRSQFISNS
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacaatttgagttggtgtctaaatatcaaccagcaggagatcaaccaaccgcg
atagcacagctgttggatggactagaatcaggccttgcccatcagacgttgctcggggtg
actgggtcaggaaaaacatttaccttagcgaatgttatcgcgcaatctcaacgcccggct
atattgctcgctcctaataagacgctggcggcgcaattgtacggggaaatgaaagctttc
ttcccaaacaactcagttgaatatttcgtttcctattacgattactaccaaccagaagcg
tatgtgcctacgacagacacgtttattgagaaagattcttcggtcaatgcgcatatcgag
cagatgcggttatcagcaactaaggccctactagagcgtaaagactcaattattgtggct
tcggtttcagcgatttatggtttaggtgatcccgattcttacctgaagatgatgctgcat
gtgagccgtggtgacgtaattaatcagcgagatgtactgcgtcgcttagcagaactgcag
tattcgcgtaatgatgtgacctttgaacggggtcaatttagagttcgcggtgaagtcatc
gatatcttccctgcggaatctgaccaaaatgcggttcgtattgagctatttgatgatgaa
gttgaatgcattagtttgtttgatcccttgactggcgcgatcgtacagcgggatctaccg
cgctacacaatatatcctaaaacccactacgtgacgccacgcgagcgcatgttagaagcg
attgaaaaaatcaaagtagagcttgaaagtagaaagaagcatctgcttgataacaacaag
ctgttagaagagcagcgcatctctcaacgaactcaatttgatatagagatgatgaacgaa
ctggggttttgctcgggtgtcgaaaactactcgcgttacctaagtggacgtggtgaagga
gaagcacccccgactttatttgactacttacccagtgatggtttgctcattattgatgaa
tcgcatgtgacggtctctcaagttggcgctatgtataagggcgaccgttcgcgtaaagaa
acgctggtggagtttggctttcgtttgccatcggcattagataatagaccgcttaaattc
gatgagtttgaatctatcgccccgcaaacgatttatgtgtctgcaacgccgggtaattat
gaaatagaaaaatctgatggtgaagttgctgaacaagttgttcggccgacagggttactt
gaccctgaattagaggttcgcccagtagcaacgcaagttgatgatttattgtcagaaatc
cgcaagcgtagccaagtgaatgaacgagtgttggtgaccaccttaaccaagcgaatggca
gaggatttgacggagtacttagatgaacatggcgttcgtgttcgttacttgcattccgat
attgataccgttgaaagggtcgaaatcattcgggatttacgcttgggtgaatttgacgtg
ttagtcggtatcaacctacttcgtgaagggttagacatgcctgaggtttctttagttgcg
atattagatgccgacaaagaagggttcttgcgttcagaacgttcattgatccaaaccata
ggtcgagcggcgcgaaacttaagcggtaaagcgattttgtatggcgataaaattacaaaa
tcgatgaaaaaagccatggatgaaaccaatcgcaggcgtgaaaagcagcaagctcataac
gaacaacaaggtattgtgcctcaagctttgaaaacctgcgtgcaggacatcatggaaatt
ggtgatattgccaaaactaaaaatagaaaaacggcgagtcatgtgcctctatctaaagtg
gcagaagcatcgaatagttatgaagtgatgtcgccgcaagaattagaaaaagccatgact
aagctcgagaatgaaatgtatagtcatgcgcaaaacttagaatttgaacaagcggctgac
aagcgagatcagttggagaagcttcgatcacagtttatttcaaacagctga
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