Vibrio tapetis subsp. tapetis: A1400
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Entry
A1400 CDS
T05424
Symbol
rluF
Name
(GenBank) Pseudouridine synthase
KO
K06182
23S rRNA pseudouridine2604 synthase [EC:
5.4.99.21
]
Organism
vta
Vibrio tapetis subsp. tapetis
Brite
KEGG Orthology (KO) [BR:
vta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vta03009
]
A1400 (rluF)
Enzymes [BR:
vta01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.21 23S rRNA pseudouridine2604 synthase
A1400 (rluF)
Ribosome biogenesis [BR:
vta03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
A1400 (rluF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
SON49379
UniProt:
A0A2N8ZBU2
LinkDB
All DBs
Position
A:complement(1468783..1469835)
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AA seq
350 aa
AA seq
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MSQELKATRLNKFISDTGFCSRREADKLIEQGRVTINGSIPEMGVKATEADEVLVDGKSL
RNKEKPIYIALNKPTGITCTTERHIEGNIVDFIGHRKRIFPIGRLDKPSDGLIFLTNDGD
IVNKILRAGNSHEKEYVVRVDKPITEEFLQKMASGVEILDTVTLPCTVTKETKFSFRIVL
TQGLNRQIRRMCEALDYEVFKLRRVRIMNISLDGIPNGKWRYLTDDEMTEIHSMCETSSG
TEEASKTDADGKAIAKATDAKLYDSRQQQTQDREPRKHKTYSGNEDSFQRRPNRSNRGDS
ASFKHEPKAKPESRGNRKPTAGAKPATNNKPDSNKSRPFKVRKPTGKTLG
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaagaattaaaagcaactcgattaaacaaattcatcagcgatacgggtttttgc
tctcgtcgtgaagccgataaattgatcgaacaaggtcgagtgaccattaatggctcgata
cctgagatgggagttaaagcaaccgaagccgatgaagtgcttgttgatggtaaatccttg
cgcaataaagagaagccgatttacatcgcgttgaacaaaccaacaggcatcacttgtaca
acagagcgccatattgaaggtaacattgttgactttattggccaccgtaaacgcatattc
ccaattggtcgattggataagccatcagacgggctgatttttttgactaacgatggagac
atcgtaaacaaaattcttcgtgctggtaattcgcatgaaaaggaatacgtggttcgtgtc
gataaaccgattacggaagagtttttacagaaaatggcgtcaggtgttgagattctagat
accgtgactttgccatgtactgtcactaaagaaaccaagttttcattccgaattgtgtta
acacaaggtcttaaccgtcaaattcgtcgtatgtgtgaagcattagactatgaagtattt
aagctgcgccgtgtgcgtatcatgaatatctcattggatgggatccccaatggtaaatgg
cgttatttaactgacgatgaaatgactgaaattcatagtatgtgtgaaacgtcgagcggc
acggaagaggcgtcaaaaaccgatgctgacggtaaagcgatcgctaaagcgaccgatgct
aaattatatgatagtcgccagcagcaaacgcaagatcgtgagcctcgtaagcacaaaaca
tactcgggtaatgaagactcgttccaacgccgaccgaatcgctctaatcgtggcgattca
gcctcgtttaagcatgagcctaaagctaagcctgaatcgagaggcaacagaaagccaaca
gcaggcgcaaagccagcaaccaacaataagcccgactcaaataaaagcagaccgtttaaa
gtccgtaagcctacgggcaaaacgttaggttaa
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