Vibrio tapetis subsp. tapetis: A1505
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Entry
A1505 CDS
T05424
Symbol
recC
Name
(GenBank) exonuclease V (RecBCD complex), gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
vta
Vibrio tapetis subsp. tapetis
Pathway
vta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A1505 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vta03400
]
A1505 (recC)
Enzymes [BR:
vta01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A1505 (recC)
DNA repair and recombination proteins [BR:
vta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A1505 (recC)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
SON49484
UniProt:
A0A2N8ZC44
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Position
A:complement(1575098..1578553)
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AA seq
1151 aa
AA seq
DB search
MFTVYHSNQVELLKSLLVELVRINPLENPFEAEQILVQSPGMSQWLKMALANEFGVAANL
DFPLPATFIWEMFTKVLPDVPKRSAFNKEAMTWKLMLCLPALLEQEEFAPLKQYLEDDTD
QSKLYQLSEKIADIFDGYLVYRPEWIAAWEAGQDVAELEGESPWQPILWQALYDQTIALG
QSPYHRANLYEHFIDSLDNFNGKVENLPKRLFVFGISSLPPRYMDALKALGEHIDVHLMF
TNPCRYYWGEVRDRKYLARLASQARKHIEWKGDHSELAGETTQLKGSVEDNVIDELHTDV
VGNGLLASMGKLGRDNMYLLSQLEANEIEAFVDLDSKSILHQIQTDILNLEEHQDDSILD
SSRHKKPIMLGDKSLQLHACHSAMREVEVLHDQLLAMFEADSTLKPRDIIVMVADINAYS
PAISSVFGNAPGERYIPYSISDRSASQESPILAAFMSLIALPESRCHASEMLELLEVPAM
MARFGLDEQQFERAKAWIEEIGVRWGLDGDTSVDFDLPTQTQNSWLFGIERMLLGYAMPD
SYGLFSGASGHISAFNEVQGMDAELAGKLAHFVEMLSHYRQALSLPQTASQWHQNIHGLL
DDFFSVELEDEMVLKSIRDGLTQLQEQLIDAGFDQEISPSVINIYLQNRLSGTRVSQRFL
AGQVNFCTLMPMRSIPFKVVCLLGMNDGAYPRSMPAEGFDLMTGRTRPGDRSRRDDDRYL
FLEALLSAQQGLYISYVGRSIQDNTEKVPSILVSELLEYCHQNYCLAGDEALAVDASGDA
LLAVLTSHHAMMPFSPSAFSLESPSYAKEWLPTVNRRGQACGEFSQPLDDYLLEFNAPYQ
LDLVELQRFWRLPVQYFFNRRLKVNFDSLQGVMEDDEPFIVGGLEGYVMRDQLLEILLES
RMKGGDETAAIASFVAEQRAKGLLPIGAFGELEFVTNSAQTQALVDEIAPLCHTELEDAE
VALVLDIDRENYHLNGWLTRLYRSGLVRYRCGKLRPQDWLSGWIDHLCLAANGHSTRTHL
IGYDKKDGVQHWVIAPIDSAQNAKQALTQLIRLYYQGMNQPLAYFPKTALAGIEACINKA
GEWVDDEDKCLNKMADTFNSGFFPGEGIDSYISRIWPQWTEELAQQVRLNSSLVLQAAVL
STTTAEEMASR
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
gtgtttactgtttatcattctaatcaagtcgaattattaaaatccttattggtcgaacta
gtcaggattaatcctcttgaaaatccgtttgaagccgaacagattttggtgcaaagccct
ggcatgtctcagtggttaaaaatggccttggcgaatgaatttggcgttgccgcaaacctt
gattttccattgccagcgacattcatttgggaaatgtttactaaagtgctgcctgatgtt
cccaagcgcagtgcctttaataaagaagccatgacatggaagctcatgctttgcttgcca
gccttgttagaacaggaagagtttgcaccgttaaagcagtatttagaagacgatacagac
caatctaagctttaccaattgtcagagaaaattgcggatatctttgatggttacttggtg
tatagacctgaatggatcgcagcatgggaagcggggcaggacgtagctgagctagaaggg
gaatccccttggcagcctattttgtggcaagcactctatgatcaaaccatagcactaggc
caatcgccttatcatcgtgccaatctatacgaacatttcatcgattccttagacaatttt
aacggcaaggtagaaaacttacctaagcgtctatttgtgttcggcatttcttcattgcct
ccgcgttatatggatgccttaaaagcgctgggggagcacatcgatgtgcatctgatgttt
accaacccttgccgttattactggggagaggtcagagacagaaaatacctcgctcgcttg
gcttctcaggcaagaaaacacattgagtggaaaggagaccattctgagttggcaggtgaa
accacacagcttaaaggcagcgttgaagataacgtcattgatgaactgcatactgatgtc
gtcggtaacggcttactagcgtccatgggcaagctcggaagagataatatgtacttactc
tctcagttagaagccaatgaaattgaagcctttgttgatctagacagtaagtcaatatta
caccaaatccaaaccgacattcttaatctagaagaacatcaagacgacagcattctggac
tctagtcgccataaaaaaccaatcatgcttggcgataaatccttacagttacatgcctgc
cacagcgctatgcgtgaagttgaggtattacatgaccaactgctggctatgtttgaagcc
gattcaacactgaaaccgcgagatatcatcgtgatggtggcagacattaacgcctatagc
cccgcgatttcctcagtgtttggtaatgcgccaggtgaacgttatatcccttattccatt
tctgatagaagtgcttctcaagaaagcccaattttagcggcgttcatgagcttaatcgca
ctacccgaaagccgatgccacgcttctgagatgctcgagttgttggaagtaccagccatg
atggcgcgatttggattagatgagcaacagtttgaacgagcgaaagcatggatcgaagaa
attggtgttcggtggggtcttgacggtgatacatccgttgattttgatttacccacgcaa
acacaaaactcctggttatttggcatagagcgaatgctattgggttatgcgatgcctgac
tcttatggtttgttttccggggcaagcggtcatatttcggcttttaatgaagttcaaggc
atggacgcagaattagcgggaaaattagcgcattttgttgagatgctgagtcactacagg
caagccctgtcattgccacaaacagccagccaatggcaccagaacatccacggactattg
gatgatttcttcagcgtcgagcttgaagacgaaatggtgcttaagtcgattagagatggc
ttaactcagttgcaagagcaattaattgatgcaggatttgaccaagaaatcagtccttcg
gtcattaatatctacttgcagaaccggttatccggcactcgtgtcagtcagcgtttctta
gcggggcaagtgaatttttgtaccttgatgcccatgcgttccattccatttaaagtggtg
tgtctattaggcatgaatgacggcgcttacccccgctcaatgcctgcagaagggtttgat
ttaatgactgggagaacaaggccgggagatcgttctcgcagagatgatgaccgttatttg
tttcttgaagctttgctctctgcgcagcaagggttgtacatcagctacgttggccgttct
attcaagataatactgaaaaagtgccgtctatcttggtttctgaattacttgagtactgc
catcagaattattgtttggcaggggatgaagcactcgcggtcgatgcgtccggtgatgct
ttgcttgccgttttaacttctcatcatgccatgatgccatttagcccgtccgcttttagt
ctggaaagccctagttacgcaaaagagtggctgccaaccgtaaaccgcagggggcaggcg
tgtggcgagtttagccaacctcttgatgattacttgttggagtttaatgcaccgtaccaa
ttagatctggttgagctacaacgcttttggcgattgcctgttcagtatttctttaatcgc
cgtttaaaagtgaattttgattccctgcaaggtgtgatggaagacgatgaaccttttatt
gttggcggcctcgaaggttatgtcatgcgtgaccagttgcttgaaatattgctcgaaagt
cgcatgaaaggtggcgatgaaaccgcagcaattgcctcttttgttgccgagcaacgagcg
aaaggcttgttgcccattggggcttttggcgaattagagtttgtgactaattcagcgcaa
acccaagctttagtcgatgaaattgcgcctttatgccataccgagttagaagatgcagaa
gttgcattagtcttggatattgatcgcgaaaactaccacttaaacggctggctcacgcgt
ttgtatcgttcaggtttagtgcgttatcgctgcggaaaactgcgcccgcaagactggtta
tcagggtggattgaccatttatgtttggcggctaatggccattcaacgcgtactcatctg
attggctatgacaaaaaagacggggtgcaacattgggtgattgccccaatagactctgct
caaaatgccaaacaggcattaacacagctgatccgtctgtattatcaaggcatgaatcaa
ccactggcatatttcccaaaaacggcactggcaggcatcgaagcttgcattaataaagcg
ggtgagtgggtggatgatgaagataagtgtttaaataaaatggcggatacgttcaacagt
ggtttctttcctggagaaggaatagacagctatatcagccgaatttggcctcagtggact
gaagaattggcacagcaagtcaggttgaattcaagcttagttttgcaagcggcagtctta
tccaccacgacagcagaagagatggcaagtcgctaa
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