Vibrio tapetis subsp. tapetis: A1548
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Entry
A1548 CDS
T05424
Symbol
radA
Name
(GenBank) repair protein radA homolog
KO
K04485
DNA repair protein RadA/Sms
Organism
vta
Vibrio tapetis subsp. tapetis
Brite
KEGG Orthology (KO) [BR:
vta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vta03400
]
A1548 (radA)
DNA repair and recombination proteins [BR:
vta03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A1548 (radA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
GvpD_P-loop
SLFN-g3_helicase
AAA_22
AAA
AAA_14
RecA
ABC_tran
AAA_16
NTPase_1
Zeta_toxin
Viral_helicase1
AAA_24
Zn_ribbon_Thio2
nSTAND3
AAA_29
Zn_ribbon_8
cobW
zinc_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
SON49527
UniProt:
A0A2N8ZC94
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Position
A:complement(1615277..1616656)
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AA seq
459 aa
AA seq
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MAKAKRAYVCNDCGADFPRWQGQCNACGAWNTISEVRLAASPQVARNERMSGYAGSATES
QVQVLSEINLQEVPRFSSSFKELDRVLGGGIVPGAAILIGGSPGAGKSTLLLQTMCRLAS
EMPTLYVTGEESLQQVAMRASRLGLPKDNLKMLSETNVDKICQIAEKEQPRIMVIDSIQV
MHVADVQSSPGSVAQVRESATALTRYAKQNNVSIFLVGHVTKDGSLAGPKVLEHIIDCSV
LLDGSNDSRFRTLRSHKNRFGAVNELGVFAMTGQGLKEVSNPSAIFLSRGEEDTSGSSVM
VVWEGTRPLLVEIQALVDYSQLANPRRVAVGLDQNRLSMLLAVLHKHGGLQMADQDVFVN
VVGGVKVTETSADLALLVALLSSFRDRPLPKDVVVFGEVGLAGEIRPVPSGQERLMEAFK
HGFKKAIVPAANMPKGGIEGMQIHGVKKLSDAIEAFDEL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagcaaaacgcgcttatgtttgtaatgattgtggcgcggattttccccgctgg
caagggcagtgcaacgcttgtggtgcatggaatacaatttcagaggttcgcttagcggca
tcgcctcaagtagcacgtaatgagcgaatgtccggttatgcgggttccgcgaccgaatcg
caagtacaggttctttctgaaatcaacttacaagaagttcctcgatttagcagtagcttt
aaagaactcgaccgagtattgggcgggggaatcgtacccggagccgcaatattgatcggt
ggcagccctggagcaggcaaatcaacattgttattgcagacgatgtgccgcttggccagc
gaaatgccgaccttgtatgtcacaggagaagagtccttacaacaagtggccatgcgagca
tctcgtttgggtttacctaaagataacttaaagatgttgtcggaaacgaacgtcgataaa
atttgccaaatagcggaaaaagaacaacctcgcattatggtgatcgactcaattcaagtt
atgcatgttgctgatgttcagtcctcccctggtagtgtcgctcaagtgagagaatctgcg
acagcattaactcgttatgcaaaacaaaataatgtctcaatattccttgttggtcatgtt
accaaagacggcagcttagctgggcctaaagtgttagagcatattattgactgttcagta
ttgttagatggcagcaacgatagccggtttagaacgttgcgtagtcacaaaaaccgtttt
ggcgctgttaatgagctcggcgtatttgctatgaccggacaaggcttaaaagaagtcagt
aatccgtccgctatctttttatccagaggtgaagaagacacttctggcagttcagttatg
gtggtatgggaaggaacaagaccactattagtagaaatacaagcgctggtggattactca
cagctagcaaatccacgccgtgtcgcagtggggctcgatcagaatagattgtcgatgttg
ctcgcagtgttgcataaacacggtgggctgcaaatggcggatcaagatgtctttgtgaac
gtagttggcggcgtcaaagtgacggaaaccagcgcagacttggcactgcttgtggcactt
ctttctagttttcgagaccgtccattaccaaaagatgtcgttgtttttggtgaagttggg
ttggctggagaaatccgcccagtaccaagtgggcaagagcgtttgatggaagcattcaag
catggtttcaaaaaagcgatagtgccagcggcgaacatgccaaaaggcggcatcgaaggt
atgcaaatacatggtgttaaaaagctttctgatgccatcgaggcttttgatgagctttag
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