Vibrio tapetis subsp. tapetis: A1581
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Entry
A1581 CDS
T05424
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase (Polynucleotide phosphorylase) (PNPase)
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
vta
Vibrio tapetis subsp. tapetis
Pathway
vta03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vta00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A1581 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vta03019
]
A1581 (pnp)
03016 Transfer RNA biogenesis [BR:
vta03016
]
A1581 (pnp)
Enzymes [BR:
vta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
A1581 (pnp)
Messenger RNA biogenesis [BR:
vta03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A1581 (pnp)
Transfer RNA biogenesis [BR:
vta03016
]
Prokaryotic type
tRNA degradation factors
A1581 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
OB_RRP5_4th
S1_RRP5
KH-I_KHDC4-BBP
KH_2
KH_SLS1_2
aRib
Motif
Other DBs
NCBI-ProteinID:
SON49560
UniProt:
A0A2N8ZCD6
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All DBs
Position
A:complement(1647011..1649143)
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AA seq
710 aa
AA seq
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MFEKPVVKSFKYGNHTVTLETGVMARQATAAVMASMDDTSVFVSVVAKKAAVEGQDFFPL
TVNYQERTYAAGKIPGGFFKREGRPSEAETLTARLIDRPIRPLFPSAFKNEVQVIATVVS
INPDVNPDMITMIATSAALSIAGVPFNGPIGAARVGHIDGELVLNPSNTELENSKLDLVV
SGTEGAVLMVESEADNLSEEEMLAAVVYGHDQQQVVIKAINEFAEEVATPSWNWEAPAVN
TELKALVAEKAETRLSDAYQITEKMARYEQVGAIKNEVVAELLASDETLDEREVRGMLGS
LEKNVVRGRIIAGNPRIDGREKDMVRALDVRTGVLPRTHGSSLFTRGETQALVTATLGTQ
RDAQIIDSLMGEKKDHFLLHYNFPPYCVGETGFVGSPKRREIGHGKLAKRGIAAVMPSIE
EFPYTVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKASVAGIAMGLVKEGDDFVVLS
DILGDEDHLGDMDFKVAGTNEGITALQMDIKIEGITKEIMQIALNQAQGARKHILTVMDE
AISGAREDISEFAPRIHTMKINTDKIRDVIGKGGAVIRSLCEETGTTIEIEDDGTVKIAA
TSGEQAEDAINRIKALTAEVEVGTIYMGKVARLADFGAFVTILPGKDGLVHISQIADKRV
EKVSDYLTEGQEVPVKVLEIDRQGRVRLSMKEAVEKPAEEAASSDEASAE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaaaaaccagttgttaagtcgtttaaatacggcaaccacaccgttactctagaa
acaggcgtaatggctcgccaagcgactgctgcagttatggcaagcatggacgatacatca
gtattcgtttctgttgttgctaaaaaagcggctgtagaaggtcaagacttcttcccgcta
acagttaactaccaagagcgtacttacgctgctggtaaaatccctggtggtttcttcaag
cgtgaaggtcgtccttctgaagctgaaacactaacggctcgtcttatcgaccgtccaatc
cgtccacttttcccaagtgctttcaaaaacgaagtacaggtaattgcaacggttgtttct
atcaaccctgacgtaaacccagacatgatcactatgatcgctacgtctgcggcactgtct
atcgctggtgttccattcaacggtcctatcggtgcagcacgtgttggtcacatcgatggc
gaactagtacttaacccttcaaatactgagcttgaaaactctaaactagaccttgttgtg
tctggtactgaaggtgcggtacttatggttgaatctgaagcagacaacttgtctgaagaa
gagatgctagcagcggttgtttacggtcacgatcaacaacaagtagtcatcaaagcaatc
aatgagttcgcagaagaagttgctactccttcttggaactgggaagcaccagcagtaaac
actgagcttaaagcgcttgttgctgaaaaagcagaaactcgtctttctgatgcttaccaa
atcactgaaaaaatggctcgttacgagcaagttggcgcaatcaaaaatgaagtcgttgct
gagcttctagcgtctgacgaaactttggatgagcgcgaagttcgcggcatgcttggttct
ctagagaaaaacgttgtacgtggccgcatcattgctggtaacccacgtattgatggtcgt
gagaaagacatggttcgtgcacttgatgttcgtactggcgttcttccacgtactcacggt
tcttctttgttcactcgtggtgaaactcaagcacttgttacggctacgcttggtacacaa
cgtgacgcgcaaatcattgacagcctaatgggtgagaagaaagatcacttccttctacac
tacaacttccctccatactgtgttggtgaaactggcttcgttggttctcctaagcgtcgt
gaaattggtcacggtaagcttgctaaacgtggtatcgcggcagtaatgccttctattgaa
gagttcccatacacagttcgtgttgtatcggaaatcacagaatctaacggttcttcttca
atggcttctgtatgtggtacgtctctagcacttatggatgctggtgttccaattaaagct
tctgttgcgggtatcgcgatgggtctagttaaagaaggcgacgacttcgttgttctttct
gacatcctaggcgacgaagatcaccttggcgacatggactttaaagtagcaggtactaac
gaaggtatcactgcgcttcaaatggacatcaaaatcgaaggtatcactaaagagatcatg
caaatcgctcttaaccaagctcaaggtgcgcgtaagcacatccttacagtgatggatgaa
gcaatttctggtgctcgtgaagatatctctgagtttgctccacgtattcacacgatgaag
atcaacactgataagatccgtgacgtaatcggtaaaggcggcgctgtgatccgttctctt
tgtgaagagactggcactacgatcgaaatcgaagacgacggtacagttaagattgctgca
acttctggtgagcaagctgaagatgcgatcaaccgcatcaaagcactaactgctgaagtt
gaagtcggtactatctacatgggtaaagttgcgcgtcttgctgatttcggtgcattcgta
acgattcttcctggtaaagatggtctagtacacatctctcaaatcgctgataagcgtgta
gagaaagtatctgactacctaacagaaggccaagaagtaccggttaaagtacttgaaatc
gaccgtcaaggccgtgtacgtttgagcatgaaagaagcagtagaaaagccagctgaagaa
gcggcatctagtgacgaagcaagcgctgaataa
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