Vibrio tapetis subsp. tapetis: A1956
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Entry
A1956 CDS
T05424
Name
(GenBank) GGDEF family protein (fragment)
KO
K20957
diguanylate cyclase [EC:
2.7.7.65
]
Organism
vta
Vibrio tapetis subsp. tapetis
Pathway
vta05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vta00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
A1956
Enzymes [BR:
vta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
A1956
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Gene cluster
GFIT
Motif
Pfam:
GGDEF
SBP_bac_3
Lig_chan-Glu_bd
Motif
Other DBs
NCBI-ProteinID:
SON49935
UniProt:
A0A2N8ZDH2
LinkDB
All DBs
Position
A:complement(2046037..2047533)
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AA seq
498 aa
AA seq
DB search
MDGVVDAINQLKPMLLAGLDAQLLNDFLSIKPVSIIRPKGKHEDILAQFVDYIHSEGIQK
HLRRSISQYQFEIRRKSLQKSVFQSDLNVDRPLRIKLDDAYPYVRYKSNGDVVGITADIL
LQSCKILSIECEVVSEADETWESMKQDLIDQKIDVLAPMTISAQRSHYVYFSEPYYYPES
MVVKRLGYKVGVYHHVSELISERIGVVRDTIFDELLTRLLPQKPLHYFDDEEALIDSLVA
NSIDYAAMDSSALNSILSSSEMLPITQAKSIGSFYRSDIAIGFVKNDLGSKLAPLFSRAI
TMLDTKAIINDYDKKPDWRTTLGLQKKFSHRTQILFVIVLAFMVSVAYFLHIQSQTDNLT
GLKNRRALYAKYRRGIKADQRVIYLDVNNFKEINDLFGHEAGDAVLKKLARIVMKFWDGN
GYRIGGDEFVLVGSGDEFVVQSMVRKLESFSVLHSGNKHSIVVAIGVSKASKESQSLNDV
LKQADHAMYTAKQESKSE
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
gtggatggtgttgttgacgcaatcaatcagctcaaaccaatgctgttagcggggctggac
gcacagttgctcaatgatttcttgtctataaagccagtttcgattattcgtcctaaaggt
aagcatgaggatatattggcgcagtttgttgattatattcattcagaaggtattcaaaaa
catctaaggcgaagcattagccaatatcagtttgagatccgtcgaaaatcactgcaaaaa
tccgtctttcaaagtgacttaaacgtggatcgaccgcttcgcatcaagttagatgacgct
tatccatacgttcgctataaaagtaatggcgatgtggtcggaataacggccgatattttg
ttgcagtcctgcaaaatactgagcatagagtgcgaagtagtgagtgaggctgatgaaact
tgggaaagtatgaagcaagatctaatcgatcaaaagattgatgtacttgctccaatgact
atctcggcccaacgtagtcactatgtctatttttcagagccatactattatcctgaatct
atggtggttaagaggcttggttacaaagtaggggtgtatcatcacgtatctgagttgatc
tcggaacgaataggcgtcgtgcgagacaccatttttgatgagctgttaacacggttactg
ccacagaaaccattgcactattttgatgatgaagaagcgctgatcgactcgttagttgcc
aacagcatagattatgcagccatggactcctcagccttgaactcgatactcagctcgtct
gaaatgctgccgattactcaggctaagtctatagggagcttttatcgttcagatatcgcc
attggctttgtaaaaaatgacctgggcagcaaattggcgccactgttttctcgtgctatt
accatgctagacaccaaggccatcatcaatgactatgataaaaaaccagactggcgcaca
acgctaggcttacagaaaaaattctctcatcgtactcaaatcttgtttgttattgtgttg
gcgttcatggtatcggtcgcttattttcttcacattcaatcacaaacagacaacctgacc
gggctgaaaaaccgtcgagctttatacgcgaaatatcgaagaggcattaaagcggatcaa
cgggtgatttacttagatgtgaataattttaaagagataaatgatttgtttggccatgaa
gcgggcgatgccgtgttgaaaaagttagctagaattgtcatgaagttctgggacggtaat
ggctatcgaattggcggtgatgagtttgttttggtgggtagcggtgacgaatttgttgtg
caatctatggtgagaaagttagagagctttagtgtgttgcactctggcaataagcattct
attgtcgttgctatcggtgtatctaaagcgagtaaagagagccaaagccttaatgatgtg
cttaagcaagccgatcatgccatgtatactgctaagcaagagagtaaaagtgaataa
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