Vibrio tapetis subsp. tapetis: A1988
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Entry
A1988 CDS
T05424
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vta
Vibrio tapetis subsp. tapetis
Pathway
vta03030
DNA replication
vta03430
Mismatch repair
vta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A1988
03430 Mismatch repair
A1988
03440 Homologous recombination
A1988
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vta03032
]
A1988
03400 DNA repair and recombination proteins [BR:
vta03400
]
A1988
Enzymes [BR:
vta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A1988
DNA replication proteins [BR:
vta03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A1988
DNA repair and recombination proteins [BR:
vta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A1988
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
DUF4143
EGF_BRNP1-3
Motif
Other DBs
NCBI-ProteinID:
SON49967
UniProt:
A0A2N8ZDI1
LinkDB
All DBs
Position
A:2080780..2081412
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AA seq
210 aa
AA seq
DB search
MLLTQQPADTLIVLDFETTGLSPNQGDRAIEIGAVKLENGQVTDRFQQLMNPGFRVSGFI
ENYTGINNNMLRNAPSCEEVMADFGEFIQGYNLVAHNASFDQRFLDAELDTIGCQYQGEF
VCSMLLARRLYQNAPNHKLGGLVEYKNIQHDGVFHRALADSEMTAKLWLQMLEDLKTQHQ
VNQPDFKLVKKITKTSKSALPQMLRRSAKG
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atgcttttaactcaacaacccgcagacacgcttatcgttctcgattttgaaaccactggt
ctttctcctaatcaaggggacagagcaatagagattggtgcagtaaaactagaaaatggt
caagtaaccgatcgttttcaacagctcatgaatccagggtttcgagttagtggttttatt
gaaaactatacggggattaataacaacatgctgcgtaatgcaccgagttgtgaagaagtc
atggctgattttggtgagtttattcaaggatataaccttgtggcgcataatgcgtctttt
gaccaacgttttttggatgcagaactcgatacaattggctgtcagtatcaaggggaattt
gtttgctcgatgctgttagcacggcgtttatatcagaatgcaccaaaccacaaactgggt
ggtttagtggaatacaagaatatccaacacgatggtgtgtttcaccgagcattagccgat
tccgagatgaccgctaaactatggttgcagatgctggaagatctaaaaacgcagcatcag
gtcaatcagccagatttcaagttagtgaaaaaaatcactaaaaccagtaaatcagcgctt
ccccaaatgctgcgtcgaagtgctaaaggctaa
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