KEGG   Vibrio tapetis subsp. tapetis: A2057
Entry
A2057             CDS       T05424                                 
Symbol
rnd
Name
(GenBank) ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
vta  Vibrio tapetis subsp. tapetis
Brite
KEGG Orthology (KO) [BR:vta00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vta03016]
    A2057 (rnd)
Enzymes [BR:vta01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     A2057 (rnd)
Transfer RNA biogenesis [BR:vta03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    A2057 (rnd)
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNAseD_HRDC_C HRDC ApbA_C
Other DBs
NCBI-ProteinID: SON50036
UniProt: A0A2N8ZDN8
LinkDB
Position
A:complement(2169348..2170598)
AA seq 416 aa
MEMCMSRIRGPYVRFCERDEAETPHPTRCLMFSAVPPFFNLEKPVNYQIIVNQTELERVC
QLAREVDTVMLDTEFVRTRTYFPQLGLIQLFDGENLSLIDPTEIDDMSAFTALLKDTAVV
KVLHACGEDLEVFAHSFGTMPTPMIDTQIMAAFLGHGLSTGFAALAKEYLDIELDKSEAR
TDWLARPLTEKQLEYAAADVFYLQPIYQKLEVAVQEAGWWEAVQQESDLVVSKRAVRHVP
DVAYIDVKGAWQLQPKQLATLQILAKWRVEEAIKRDLALNFVFREQDMLECARLNIKSLK
KMEQEGFDFREIRRHGNRVIAMVKEGELVPEEEWPQAIDRLMDLPGYKQLFKDLKDEVKR
AAQATGLATEFLASKKQLNQVFTWVWKKDRDPSTLPDTMQGWRLEVLGEKLIKHFD
NT seq 1251 nt   +upstreamnt  +downstreamnt
atggaaatgtgcatgagccgtatacgaggtccgtacgtacggttctgtgagagggatgag
gcggagacgcctcaccctactcgatgtcttatgtttagtgccgttccgcccttttttaac
ttagagaagccagtgaattatcaaatcattgtcaaccaaactgaattagaacgcgtttgt
caacttgccagagaagttgataccgttatgttggataccgaatttgttcgcacacgtacc
tattttccgcagcttgggctgatccaacttttcgatggcgaaaacttgtcattaattgat
ccgacagaaatcgacgatatgagtgcattcaccgcgttgctgaaagacacggcagtggta
aaggtgttacatgcctgtggtgaagacttagaagtgttcgcgcattcatttggaaccatg
ccaaccccgatgattgacacccaaatcatggcggcgtttttaggccatggtttgtcgaca
ggctttgctgccctagcgaaagagtatcttgatatcgagttggacaaaagcgaagctcga
acagactggttagcaagaccactgactgaaaagcaactcgaatacgcggccgccgatgtg
ttttatttgcagcctatttatcaaaagcttgaagtcgcagtgcaagaggctggctggtgg
gaagccgtgcagcaagaatctgatttagtcgttagtaagcgtgctgtacgtcatgtacca
gacgtcgcttacatcgatgtaaagggcgcttggcaattacagccaaagcagttagctacc
ctccaaattctagctaaatggcgtgtcgaagaagccattaagcgtgatttggcacttaac
tttgtgttccgtgaacaagatatgcttgaatgcgctcgtttaaacattaagagcttgaag
aaaatggagcaagagggctttgattttcgagaaattagacgccatggcaatcgagtgatc
gcgatggtaaaagaaggcgagttagtaccagaagaagagtggccgcaagccattgaccgt
ttaatggatcttcctggttataagcaattgtttaaagacctaaaagatgaagtaaagcgt
gctgcgcaagcaaccggcttagcaacagaattcttagcgtctaaaaagcagctcaatcaa
gtgtttacttgggtatggaagaaagaccgcgatccaagcactctaccagacaccatgcaa
ggttggcgtttggaagtcttaggcgagaagctaatcaagcactttgattaa

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