Vibrio tapetis subsp. tapetis: A2204
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Entry
A2204 CDS
T05424
Symbol
fliA
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
vta
Vibrio tapetis subsp. tapetis
Pathway
vta02020
Two-component system
vta02040
Flagellar assembly
vta05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vta00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
A2204 (fliA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
A2204 (fliA)
09142 Cell motility
02040 Flagellar assembly
A2204 (fliA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vta03021
]
A2204 (fliA)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vta02035
]
A2204 (fliA)
Transcription machinery [BR:
vta03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A2204 (fliA)
Bacterial motility proteins [BR:
vta02035
]
Flagellar system
Flagellar assembly proteins
Stator
A2204 (fliA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
UPF0122
GerE
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
SON50183
UniProt:
A0A2N8ZE49
LinkDB
All DBs
Position
A:complement(2327352..2328086)
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AA seq
244 aa
AA seq
DB search
MNKALTYDQFGNPGNQSAFLERYSGLVKRIAHHLIGRLPPNVLVDDLIQSGMIGLIEAQQ
NYDGTKGASFETYAGIRIRGAMLDEMRRGDWVPRSVHKSNRTISQAINELESKLTRDPTD
AEVAKHLNMSLEQYHNALTDINCSRLVGIEDLGVSEDAISPHEASEDNLPFKGVADESFR
QALVDSIKTLPEREALVLSLYYDEELNLKEIGEVLDVSESRVSQIHSQSMQRLRAKLSAW
TINE
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaggcgctaacatatgatcaatttgggaacccaggaaaccagtctgcgtttctt
gagcgttattcaggtttagtcaaaaggattgcgcaccacctcattggtcgattaccaccg
aatgtacttgtcgatgacctgattcaatcaggcatgattggtctaatcgaagctcagcaa
aattacgatggaaccaaaggtgccagctttgaaacctatgctggtatccggattcgtggt
gccatgttagatgaaatgcgtcgaggcgattgggtgccacgatcagtgcataaaagcaat
agaaccatcagtcaggcgataaatgagctagaatcaaaattgacgcgtgatccaactgat
gcagaagtagccaaacacttaaatatgtcgttagaacagtatcataatgcgttaactgat
ataaactgttcaagactagtaggaattgaggacctaggtgtatcagaagatgccatttca
ccacacgaagcatcggaagataacttaccattcaagggggtagccgatgagtcgtttcga
caagctttggttgattcgattaagacgctcccagaaagagaagctctagttctttctctc
tattatgatgaagagctaaatttaaaagaaattggggaagtattagacgtaagtgaatct
cgcgtaagtcaaatacatagccaatcaatgcaacgtttacgtgccaaacttagtgcgtgg
acaatcaatgagtaa
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