Vibrio tapetis subsp. tapetis: A2329
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Entry
A2329 CDS
T05424
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
vta
Vibrio tapetis subsp. tapetis
Pathway
vta03030
DNA replication
vta03430
Mismatch repair
vta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A2329 (dnaE)
03430 Mismatch repair
A2329 (dnaE)
03440 Homologous recombination
A2329 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vta03032
]
A2329 (dnaE)
03400 DNA repair and recombination proteins [BR:
vta03400
]
A2329 (dnaE)
Enzymes [BR:
vta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A2329 (dnaE)
DNA replication proteins [BR:
vta03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A2329 (dnaE)
DNA repair and recombination proteins [BR:
vta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A2329 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
SON50308
UniProt:
A0A2N8ZEJ6
LinkDB
All DBs
Position
A:complement(2447294..2450773)
Genome browser
AA seq
1159 aa
AA seq
DB search
MSDPKFIHLRIHSDFSMVDGLSKVPPIVKKVAEYGMPAMALTDFTNLCGLVKFYNTATNC
GIKPIIGADFTMQSAEFGDELTKLTVLATDNKGYNNLTLLISEAYQRGHVLHQPVIDKEW
LANHNEGLIILSGGRVGEVGRALLKGNHSLVEECVAFYQQYFPDRFYLELTRTGRADEES
YLHFALDLAEKTDLPVVATNEVVFLNEEQFDAHEIRVAIHDGFTMVDPRRPKNYSAQQYL
RTEEEMCELFADIPEALQNSVEIAKRCNVTVRLNEYFLPNFPTEGMAIEDFLVKKSEEGL
ERRLAFLFPDEEVRLQRRPEYDERLKIELDVVNKMGFPGYFLIVMEFIQWSKDNDVPVGP
GRGSGAGSLVAYALDITDLDPLEYDLLFERFLNPERVSMPDFDIDFCMDKRDQVIDHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPEPGMTLEKAFKAEPQ
LPEIYEADEEVRALIDMCRILEGCTRNAGKHAGGVVISPTTITDFAPIYCDADGNFPVTQ
FDKNDVETAGLVKFDFLGLRTLTIIDWALGLVNPRLKREGKEPVRIDSIPLDDQASFNLL
QNSETTAVFQLESRGMKDLIKRLQPDSFEDIIALVALFRPGPLQSGMVDNFIDRKHGREA
VSYPDEKWQHETLKETLEPTYGIILYQEQVMQIAQILAGYTLGGADMLRRAMGKKKPEEM
AKQRTIFEEGAIANGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPA
EFMAAVMTADMDNTEKVIGLVDECIRMKLKVLPPDINAGLYRFNVDESGAVVYGIGAIKG
VGEGPIENIIAARDKGGYFKDLFDFCARVDIKKVNKRVIEKLIYAGALDRLGPHRAAMMA
SLNDAVKAASQHHQAEAFGQSDMFGVLTDAPEEVEQKYTQVPPWPEKVWLEGERDTLGLY
LTGHPINAHLKELAKYTSCRLNDAQPTRRDQSLTIAGLVIAARVMTTKRGTRIGLMTLDD
RSARMEVMLFSDALEKYAELLEIDKILVISGQVSFDDFNGGLKMSARDVMDLGNAREKYA
RALSVSILEEQIDSQFFERFSQILEPHRAGTVPVNVYYQRHDARARLALGVEWRVTPNDT
LIDELKQLLGQGQVELEFN
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaccctaaatttattcacctacgaatccacagcgacttctcaatggtggatggc
ctttctaaagtgccacctattgtgaagaaagtagcagaatatggaatgccagcaatggcg
ctgacagattttaccaacctttgtggtttggtgaagttttataatacagcgacgaattgc
ggtatcaagccgatcattggtgcagactttaccatgcaatctgcggagtttggcgatgag
ttgaccaaactaacggtgctagctaccgataacaaaggttacaacaacctaaccttgttg
atttctgaagcttaccagcgtggacatgttttacaccaacctgtcattgataaagagtgg
ttggcaaaccataacgaaggtttgattattttatcaggtgggcgtgttggtgaggttggc
cgagcgttattaaaaggcaatcacagcttagttgaagaatgtgttgccttttaccagcag
tacttccctgatcgtttttacttagaattaaccagaacaggtcgtgctgacgaggagagc
tacttacactttgcgttagatttggccgaaaagacagatttgcctgttgtcgccacgaac
gaagtggtgttcctaaatgaagaacaatttgatgcccatgagatccgtgtagcgatccat
gatggcttcaccatggttgatcctcgccgaccaaaaaactacagcgctcagcagtacctg
cgtactgaagaggaaatgtgtgagctttttgctgatattccagaagcactacagaacagt
gtcgaaatagctaagcgttgtaacgttaccgtccgtttaaacgagtactttttgcctaac
tttccaacggaagggatggcgattgaagatttcttggtcaaaaaatcagaagaagggcta
gagcgtcgcttggctttcttattccctgatgaagaagtgcgtttacagcgtcgaccagaa
tacgatgagcgcttgaaaatcgagctcgacgttgtcaacaaaatgggctttccgggttac
ttccttatcgtaatggagttcatccagtggtctaaagataacgatgtgcctgttgggcct
ggtcgtggttctggtgccggttccttagtggcatacgccctggacatcacagacttagac
ccacttgaatacgatttactgtttgaacgtttcttgaacccagaacgtgtctccatgccc
gatttcgatatcgatttctgtatggataaacgagatcaagttatagaccacgttgctgaa
atgtatggccgagatgcggtatctcagatcattacctttggtaccatggcggcaaaagcg
gttattcgagatgttggccgtgtgttgggtcatccatatggatttgtcgatcgtatatca
aagctggttccaccagagccgggcatgactcttgagaaagccttcaaagcggaaccacaa
ctgccagaaatatacgaagccgatgaagaagtacgcgcgcttatcgatatgtgccgtatt
ctggaagggtgtacacgtaacgccggtaaacacgcagggggggttgttatatcccccact
accattactgactttgccccgatatattgcgatgccgatggtaacttccctgttacccag
tttgacaaaaatgatgttgaaacggcaggtttggttaaattcgatttcttggggttacgg
acactaaccattattgattgggctttaggcctggttaaccctagattaaagcgcgaaggc
aaagagcctgttcgaattgattcgattccattagacgatcaagcgtcgttcaatctgtta
caaaactcggaaacgacagcggtattccagctcgaatctcgaggcatgaaagatctgatc
aagcgcctgcaaccggatagctttgaagatattatcgcattggtggctctgtttcgaccg
ggtcccttgcaatctggcatggtagataactttatcgaccgtaaacacgggcgagaagcg
gtctcttatccagatgaaaaatggcaacatgaaacgctaaaagaaactctagagcccacg
tacggcattatcttgtatcaagaacaagtcatgcaaatcgcccaaatattggctggttat
acgcttggtggggcggacatgcttcgtcgtgctatgggtaagaaaaaaccagaagaaatg
gcgaaacagcgtactatcttcgaagaaggcgccatagcaaatggcgttgatggcgaactc
gccatgaagatcttcgatttagtagagaaattcgcagggtacggttttaacaaatcgcac
tcagcggcctacgcattggtttcgtatcagactctttggctgaaaacgcattatcctgcg
gagttcatggcggcagtaatgaccgccgatatggataacacggaaaaagtcattggcttg
gttgatgaatgcatcagaatgaagctgaaagtgctaccacctgacatcaatgctggttta
tatcgtttcaatgttgatgagagcggcgcggttgtttatggtatcggtgcaattaaaggg
gtaggtgaaggtccgatagaaaatatcattgccgccagagacaaaggtggctattttaag
gacttgtttgacttttgtgctcgtgttgatatcaagaaagtaaacaaacgcgttatcgaa
aaactgatttacgcgggcgcgcttgataggcttggtcctcatcgtgctgcaatgatggca
tcacttaacgatgcagttaaagctgccagccaacaccatcaggctgaagcgtttggtcag
tccgatatgtttggtgtgttaaccgacgcgccagaagaagtagaacaaaaatatacacaa
gtaccgccgtggccggaaaaggtttggttagaaggcgaaagggatacattaggcctgtat
cttactggtcatcccattaatgcgcatttaaaggaacttgctaagtataccagttgtcga
ctaaatgatgctcagccaacacgaagagatcagtcgctaaccattgcagggctagttatt
gcagcccgagtaatgacaactaagcgagggactcgcatcggtttgatgacattagacgat
cgttcagctcgaatggaagtcatgctattctctgatgcattagaaaagtatgctgaactt
cttgaaatagataaaattttggtcatttccggacaggtcagctttgatgactttaacggt
ggccttaaaatgtcggcgcgagatgtcatggatcttggaaatgcccgtgaaaaatacgca
cgtgcgttgtccgtatctattttagaagaacaaatagatagccaattttttgagcgtttt
agtcagatactagaacctcatcgagcgggaaccgtaccagtcaatgtctactaccaacgc
cacgatgcccgtgcgcggcttgctcttggtgtagagtggcgagttacgccaaacgacaca
ttgatcgacgaattaaagcagctacttggccaaggtcaggtagaactggaatttaactaa
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