Vibrio tapetis subsp. tapetis: A2404
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Entry
A2404 CDS
T05424
Symbol
yfhD
Name
(GenBank) putative transglycosylase
KO
K18691
peptidoglycan lytic transglycosylase F [EC:
4.2.2.29
]
Organism
vta
Vibrio tapetis subsp. tapetis
Brite
KEGG Orthology (KO) [BR:
vta00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vta01011
]
A2404 (yfhD)
Enzymes [BR:
vta01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
A2404 (yfhD)
Peptidoglycan biosynthesis and degradation proteins [BR:
vta01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
A2404 (yfhD)
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_3
SLT
Motif
Other DBs
NCBI-ProteinID:
SON50383
UniProt:
A0A2N8ZEP4
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Position
A:2522189..2523694
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AA seq
501 aa
AA seq
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MKIKAPISWLFSLTFWLAVATGLSGCQIESDPKSELDQIRERGTLRVGTLNNQLSYYIGP
DGPTGLDYELATRFAKSLDVKLEMKPAYRLAELFPALERGEIDMIAAGLSHTPQRLKQFR
AGPTYYYVSQQVVYKKGQWRPRNLNQLVERQIPLVVVKGSHFEDSLAKMQKDEPAIIFRT
DDNSDVNDLMLKVSTGELPLTMADSVELSLAQRIYPSLAVAFEVTEDQPISWFMRRSDDE
SLYALLIEFFGNLKQSGKLAKLEEKYFGHVESFDYVDTRAFIRALDKTLPKWEPLFKKYA
KDFDWRLIAALAYQESHWNPVAKSPTGVRGMMMLTLPTAKIVGVTNRLDPEQSVRGGAEY
LRRIVARVPDSISEHEKIWFALASYNVGYGHMMDARRLTKSQGADPDSWADVKDRLPLLK
KKKYYSRTRYGYARGDEARNYVENIRRYYQSIIGHIDKKRIIEQQISMDDLQVIDIPISG
ASATLSPDADTSASASTLPSK
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
ttgaagataaaagccccgatttcttggctattctccctcacattttggttggcagttgcc
actggactgtctggttgtcagatcgaatctgacccaaaaagtgaactagaccaaatccgc
gaacgcggcacgctgcgcgttggcactcttaacaatcaactttcctattacatcggccca
gatggccctactggtttagattacgagctcgcgacgcgctttgctaaaagcctagatgta
aaacttgaaatgaaacctgcctatcgcttggcggagttattcccggcactagaacgtggc
gagatcgacatgatagcagcagggttaagccatactcctcaacgcctaaaacaatttcga
gcgggcccaacgtactactacgtaagccaacaggttgtctacaaaaagggacaatggcgg
cctcgtaacttaaaccaattggtcgagagacaaattcctttagtggtcgtcaaaggctca
cattttgaagatagcctcgccaagatgcaaaaagatgaaccggcgatcatttttcggaca
gacgataattccgacgtcaatgatctgatgcttaaagtatcgacaggggaattaccttta
accatggctgactctgtcgagctttcattggcgcagcgtatttacccctctttagctgtc
gcctttgaagttaccgaagaccaacctatttcttggtttatgcgccgttctgatgatgaa
agcctttatgccttgctgattgagttttttggtaatttaaagcagtcaggaaagttagct
aagctggaagagaaatactttggccacgtcgaaagctttgactacgtcgatacacgagct
ttcattcgtgcgcttgataaaacactgcccaaatgggagcccttatttaagaagtacgct
aaagattttgattggcgtctcattgcggcactcgcttatcaagagtctcattggaatcct
gttgccaagtcgcccacaggtgtgcgaggcatgatgatgcttacattgccaaccgctaaa
atcgttggtgtgacgaatcggctcgatccagagcaatcggttcgtggtggcgcggagtat
ctacgccgaatcgttgcccgagtgcccgactctatctctgagcatgagaaaatttggttt
gcgctcgcatcatacaatgtcggttacggtcatatgatggatgcaagacgcctaactaaa
tctcagggtgcagatccagattcatgggctgacgtgaaagacagattgcctctgttgaaa
aagaaaaagtactacagcaggactcgttatggctatgctcgcggtgatgaagctcgtaat
tatgtagaaaacatccgccgttactaccaatctatcattgggcatattgataagaagcgc
attattgagcagcaaatttcaatggatgatctgcaagtgatcgatattcctatttcaggc
gccagtgcaacgctatcacctgatgcagatacatcggcttctgcctcaacattaccaagt
aaataa
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