Vibrio tapetis subsp. tapetis: A2616
Help
Entry
A2616 CDS
T05424
Symbol
nfo
Name
(GenBank) endonuclease IV with intrinsic 3'-5' exonuclease activity
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
vta
Vibrio tapetis subsp. tapetis
Pathway
vta03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A2616 (nfo)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vta03400
]
A2616 (nfo)
Enzymes [BR:
vta01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
A2616 (nfo)
DNA repair and recombination proteins [BR:
vta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
A2616 (nfo)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
SON50589
UniProt:
A0A2N8ZF94
LinkDB
All DBs
Position
A:complement(2743949..2744794)
Genome browser
AA seq
281 aa
AA seq
DB search
MKLIGAHVSAAGGVDNAPMRAREIGANAFALFTKNQRQWVAKPLDAKTISAFKANCKMLG
FGPESILPHDSYLINLGAPEEEKLQKSRDAFVDEMERCHQLGLHLLNFHPGSHLKKISES
DCLARIAESINLAHQAVPDVVAVIENTAGQGTNLGWRFEHLAEIIEQVEDKQRVGVCLDT
CHTFTAGYDLRSKESCEATFTEFDQVVGMHYLKAMHINDSKVEFASRVDRHHSLGKGEIG
WPCFEYIMKDDRFNGIPLILETIEPSIWPDEIQQLRMFEKK
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaattggggcacatgtatctgctgctggtggcgtggataatgcaccgatgcgt
gcaagagagattggtgcgaacgcatttgcgctatttactaaaaatcagcgtcagtgggtg
gcaaagccactcgatgcaaaaaccatttctgcctttaaagctaactgcaagatgctgggc
tttggccctgagagtattttgccacatgactcctacttgattaatttgggggctcctgaa
gaagaaaagctgcaaaagtctcgcgatgcttttgttgatgagatggaacgttgtcatcag
cttggtttgcatttactgaattttcatccaggtagtcatttaaagaagatctctgagtct
gattgcttggctcgtattgctgagtcgatcaacttggctcaccaagcggttccagatgtg
gttgcagtgattgagaatacagccgggcagggaactaacttaggctggcgatttgagcac
ctagcggaaatcattgaacaggtggaagacaaacaaagggtcggagtttgcctcgatact
tgccacactttcactgcaggttacgatcttcgtagtaaagaatcttgtgaagcgacgttt
acagaatttgatcaagtggtgggaatgcactacttgaaggcaatgcacattaatgattct
aaagtagaatttgcgagcagagtggatcgtcaccattccttaggcaagggcgaaattggt
tggccgtgtttcgaatacatcatgaaagacgacagatttaacggtatcccattgatttta
gaaacaattgaaccatcaatttggcctgacgaaatccaacaattacgtatgtttgaaaaa
aagtag
DBGET
integrated database retrieval system
