Vibrio tapetis subsp. tapetis: A2720
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Entry
A2720 CDS
T05424
Symbol
ssb
Name
(GenBank) Single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
vta
Vibrio tapetis subsp. tapetis
Pathway
vta03030
DNA replication
vta03430
Mismatch repair
vta03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A2720 (ssb)
03430 Mismatch repair
A2720 (ssb)
03440 Homologous recombination
A2720 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vta03032
]
A2720 (ssb)
03400 DNA repair and recombination proteins [BR:
vta03400
]
A2720 (ssb)
03029 Mitochondrial biogenesis [BR:
vta03029
]
A2720 (ssb)
DNA replication proteins [BR:
vta03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
A2720 (ssb)
DNA repair and recombination proteins [BR:
vta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
A2720 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
A2720 (ssb)
Mitochondrial biogenesis [BR:
vta03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
A2720 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
SSB_1
RhlB
TFIIA
SUIM_assoc
DUF6264
Lin-8
Motif
Other DBs
NCBI-ProteinID:
SON50693
UniProt:
A0A2N8ZFJ9
LinkDB
All DBs
Position
A:complement(2862324..2862887)
Genome browser
AA seq
187 aa
AA seq
DB search
MASRGINKVILVGNLGNDPEIRYMPNGNAVANITIATSESWRDKATGEQREKTEWHRVAL
FGKLAEVAGEYLRKGSQVYIEGQLQTRKWQDQSGQDRYTTEVVVQGFNGVMQMLGGRQGQ
GGQSQGMGGQQQQQGSWGQPQQPVQHAPQQQQAPQHQAQQAPQQQAPQKAQPQYNEPPMD
FDDDIPF
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggcaagccgtggaataaacaaagttattttagtgggaaatctaggtaacgaccctgag
attcgctatatgcccaatggcaatgccgtggcgaacatcactatcgcaacgtctgaatct
tggcgtgacaaagcaactggcgaacaacgtgaaaagaccgaatggcaccgtgttgcactt
ttcggtaagttggctgaagttgcgggtgaatacttacgtaaaggttctcaagtatacatt
gaaggtcaacttcaaacgcgtaaatggcaagatcaaagtggccaagatcgctacacaaca
gaagtggttgtgcagggctttaacggtgtgatgcaaatgctaggtggccgtcaaggtcaa
ggtggtcaatcacaaggtatgggcggccaacagcaacaacaaggaagctggggtcagcca
cagcaacctgttcaacatgcgcctcaacagcaacaagcgccacaacatcaagcgcagcag
gctcctcaacaacaggcgcctcaaaaagctcaacctcagtacaatgagcctccaatggac
tttgatgatgatatcccattctag
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integrated database retrieval system
