Vibrio tapetis subsp. tapetis: A2783
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Entry
A2783 CDS
T05424
Symbol
rpoA
Name
(GenBank) RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
vta
Vibrio tapetis subsp. tapetis
Pathway
vta03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
vta00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
A2783 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vta03021
]
A2783 (rpoA)
03400 DNA repair and recombination proteins [BR:
vta03400
]
A2783 (rpoA)
Enzymes [BR:
vta01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
A2783 (rpoA)
Transcription machinery [BR:
vta03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
A2783 (rpoA)
DNA repair and recombination proteins [BR:
vta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
A2783 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Motif
Other DBs
NCBI-ProteinID:
SON50749
UniProt:
A0A2N8ZFQ5
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All DBs
Position
A:complement(2931114..2932106)
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AA seq
330 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSATHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IEGVLHEYSTKEGVQEDILEILLNLKGLAVKVAEGKDEVFITLNKSGSGPVVAGDITHDG
DVEIANPEHVICHLTDDNAEIAMRIKVERGRGYVPASSRIHTEEDERPIGRLLVDATYSP
VDKIAYAVEAARVEQRTDLDKLVIDMETNGTLDPEEAIRRSATILAEQLDAFVDLRDIRV
PEEKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKS
LTEIKDVLASRGLSLGMRLENWPPASIAED
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtaacagaatttcttaagccacgtctagttgacatcgaacaagtcagc
gcgacacacgcaaaagtaactcttgagccattagagcgtggctttggtcatactctaggt
aatgcgcttcgtcgcatccttctatcttctatgcctggttgcgcagtaaccgaagtagag
attgaaggcgttcttcacgagtacagcaccaaagaaggtgtacaagaagatatcctagag
atccttcttaacctgaaaggtcttgctgttaaagtggcagaaggcaaagatgaagtattc
attacgctgaataagtcaggctcgggccctgttgttgcaggtgacatcacccatgatggt
gatgtagagatcgctaacccagagcacgttatttgtcacctaacggatgacaacgctgaa
atcgctatgcgtattaaagtagaacgtggtcgtggttatgtaccagcatcatctcgtatc
catactgaagaagatgagcgtccaatcggtcgtttgcttgtagatgcaacttacagccca
gtagacaaaattgcctacgcggttgaagcggcacgtgtcgagcaacgtactgacttagac
aagcttgttatcgatatggaaacgaatggtactcttgaccctgaggaagctatccgtcgt
tcagcaactattcttgctgagcaactagatgccttcgtcgatcttcgtgacattcgtgtc
cctgaagagaaggaagagaagccggaattcgatccgatcctactgcgtcctgtagacgat
cttgaactaacagttcgctctgctaactgtttgaaagcagaagcgattcactacatcggt
gatcttgtacagcgcactgaggttgagcttcttaaaacgccaaaccttggtaaaaaatct
cttacagagattaaagacgtacttgcttcacgtggtctttctcttggcatgcgccttgaa
aattggccaccagcgtcaattgctgaagattaa
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