Vibrio tapetis subsp. tapetis: A2849
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Entry
A2849 CDS
T05424
Symbol
aphA
Name
(GenBank) Transcriptional regulator PadR family
KO
K10917
PadR family transcriptional regulator, regulatory protein AphA
Organism
vta
Vibrio tapetis subsp. tapetis
Pathway
vta02024
Quorum sensing
vta05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vta00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A2849 (aphA)
05111 Biofilm formation - Vibrio cholerae
A2849 (aphA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vta03000
]
A2849 (aphA)
Transcription factors [BR:
vta03000
]
Prokaryotic type
Helix-turn-helix
PadR family
A2849 (aphA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PadR
Vir_act_alpha_C
HTH_34
Motif
Other DBs
NCBI-ProteinID:
SON50815
UniProt:
A0A2N8ZG25
LinkDB
All DBs
Position
A:2986104..2986643
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AA seq
179 aa
AA seq
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MSLPHVILTVLSTRDATGYDITKEFSYSIGYFWKASHQQVYRELNKMALNDLVTCVLEPQ
EGKPDRKVYSITDAGRKALGEWFDQPTAHPTVRDEFSAKLMACAVQPSASFIEQLGGLIE
ESRKLVSHYQEIESVYYAKPETLDKQARLERLTLRRNLLLRQAWVVWAEESLADLEAMA
NT seq
540 nt
NT seq
+upstream
nt +downstream
nt
atgtcattaccacacgtaatccttacagtactgagcacccgcgacgccactggatacgac
ataacaaaagaattttcatacagcatcggctatttttggaaagcaagccaccaacaggtg
tatcgcgagctaaacaaaatggcgctaaacgatctggttacttgtgtattggaacctcaa
gaaggcaaacctgacaggaaggtttactccattacagacgctggccgcaaggcacttggt
gaatggtttgatcaacctaccgctcatccaacagtgagagacgagttctcagcaaaactg
atggcatgtgcagttcaaccttcagcttctttcatcgagcaacttggtggtttgattgaa
gagtctcgtaaactcgttagccactatcaagagattgaatccgtttattacgcaaaacca
gaaacactagacaagcaagcgcgtcttgagcgtcttactttgcgtcgtaaccttcttctt
cgccaagcttgggttgtttgggcggaagagtcattagctgatttagaagcgatggcataa
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integrated database retrieval system
