Vibrio tapetis subsp. tapetis: A3207
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Entry
A3207 CDS
T05424
Symbol
uvrD
Name
(GenBank) DNA-dependent ATPase I and helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vta
Vibrio tapetis subsp. tapetis
Pathway
vta03420
Nucleotide excision repair
vta03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A3207 (uvrD)
03430 Mismatch repair
A3207 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vta03400
]
A3207 (uvrD)
Enzymes [BR:
vta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A3207 (uvrD)
DNA repair and recombination proteins [BR:
vta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A3207 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
A3207 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
SON51173
UniProt:
A0A2N8ZGX5
LinkDB
All DBs
Position
A:complement(3366217..3368388)
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AA seq
723 aa
AA seq
DB search
MDASLLLDGLNDKQREAVAAPLNNMLILAGAGSGKTRVLVHRIAWLMSVEQASPFSIMSV
TFTNKAAAEMRGRIEELMMGSSSGMWNGTFHGICHRILRAHYLDAKLPEDFQIIDSDDQQ
RLLKRLIKALNLDEKQWPARQACWWINGKKDEGLRPNHIDAYHDPVTKTWLQIYTAYQEA
CDRAGLIDFAEILLRAQELLRDKQHIREHYQARFKHILVDEFQDTNNIQYAWLRMMAGPE
CNVMIVGDDDQSIYGWRGAKIENIQRFLDEFVGASTVRLEQNYRSTKTILKAANELIGNN
TERMGKELWTDGNDGDPISVYSAYNELDEARFAVSKIKEWKEKGGSLTDAAMLYRNNAQS
RVLEEALIQAGLPYRIYGGMRFFERLEIRDALGYLRLMSNRNDDAAFERVVNTPTRGLGD
KTLETIRFAARERGATMWQTSVALLDEQVFAGRAAGALSRFVELVNALEDDTAEMALHEQ
ADHAIKFSGLFAMYEQEKGEKSKARIENLEELVTATRQFEKPEEADEMSELSAFLSHAAL
EAGEGQADEFDEAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEESGRLEEERRLCY
VGMTRAMEKLYITYAEMRRLYGQDKYHKPSRFIRELPETCLDEVRMKAQVSRPTSTGRFS
PTAVKENFNETGFSLGARVMHPKFGEGTIINFEGSGPQSRVQVAFNGEGIKWLVTQYAKL
ETL
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggacgcttccttattacttgatggtttgaatgacaaacaacgcgaagctgtcgcagcg
ccgctaaacaatatgttgatcttagcgggtgcgggcagtggtaaaacccgagtgctggtg
catcgcattgcgtggctgatgtcggtagagcaagcgtcgccgttttctattatgtcggtt
acatttaccaataaggctgctgcagagatgcgtggccgtattgaagagctaatgatgggc
agttcgtcaggcatgtggaatggtacgttccatggtatttgtcaccgcatcctgcgcgcg
cattatcttgatgccaagctgccagaagactttcaaatcatcgactctgatgatcaacag
cgcctgcttaagcgtttgataaaagcactgaatctagatgagaagcaatggcctgcacgt
caagcttgctggtggattaacggtaaaaaagatgaaggtttacgtccaaatcacattgat
gcctatcatgatccggtgaccaaaacatggctacagatttataccgcttatcaagaagcg
tgcgatcgcgcaggcttgatcgactttgcagaaattttattgcgtgctcaagaattactg
cgcgataagcaacacattcgtgaacactatcaagcgcgttttaagcacatcttggtcgac
gaatttcaagataccaacaacattcaatacgcttggctacgcatgatggcaggccctgaa
tgtaacgtgatgatcgtaggtgatgacgatcaatccatttatggctggcgtggcgcaaaa
atagaaaatatccaacgttttcttgatgaatttgtgggcgcttcaacggtgcgtttggag
caaaattaccgttcgacaaaaaccattctgaaagccgctaatgaattgattggcaataat
accgagcgtatgggtaaagagctttggacggatggcaatgatggcgatcctatctcggtg
tactctgcgtataacgaattagatgaagcccgctttgccgtcagtaaaattaaagaatgg
aaagaaaaaggtgggtcgttaaccgatgcggccatgctgtaccggaacaacgctcagtca
cgtgtgttggaagaagccttaattcaagcaggattaccgtatcgtatttatggtggcatg
cgattcttcgaacgtttagaaattcgtgatgcactgggttacctacgtcttatgtctaac
cgtaatgatgatgcggcatttgagcgagtggtgaatacgcccactcgtggcttaggtgat
aaaacactagagaccatccgttttgcagctcgcgagcgcggagcgaccatgtggcaaacc
agtgttgccttgttagacgaacaagtatttgccggccgtgctgcgggcgcgttaagccgt
tttgttgaactggtgaatgcactcgaagatgacaccgctgaaatggcactgcacgaacaa
gcagaccatgcgattaagttctcaggtttgtttgctatgtacgagcaagaaaagggcgag
aaatcgaaagcccgaattgaaaacttagaagaattggttacggcgactcgtcagtttgaa
aaaccagaagaagccgatgaaatgagtgagctatctgctttcttatctcacgctgcattg
gaagcgggggaaggccaagcggatgaattcgatgaggccgtccaactcatgactctgcac
agtgctaaggggttagaattccctttggtgtttatggtgggtgtggaagaaggcatgttc
ccaagccaaatgtcggctgaagaatcaggccgtttggaagaagagcggaggctttgctac
gtaggcatgacgcgagcaatggaaaagctctacattacttatgccgaaatgcgccgcctg
tacgggcaagataaatatcataagccgtctcgcttcatacgtgagttaccagaaacttgt
ttagatgaagtgcgcatgaaagcgcaggtgagccgaccgactagcacaggtcgctttagt
ccaactgcggtaaaagaaaatttcaacgaaactggctttagtttaggtgcgcgagtaatg
catccgaaatttggtgaaggcacgatcattaattttgaaggcagtggccctcaaagccga
gttcaagtcgcctttaatggtgaaggcattaagtggttagtcacccaatatgcaaaatta
gagacgttatag
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