Vibrio tapetis subsp. tapetis: A3232
Help
Entry
A3232 CDS
T05424
Symbol
thiC
Name
(GenBank) hydroxymethylpyrimidine moiety synthesis in thiamin biosynthesis
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
vta
Vibrio tapetis subsp. tapetis
Pathway
vta00730
Thiamine metabolism
vta01100
Metabolic pathways
vta01240
Biosynthesis of cofactors
Module
vta_M00127
Thiamine biosynthesis, prokaryotes, AIR (+ DXP/tyrosine) => TMP/TPP
Brite
KEGG Orthology (KO) [BR:
vta00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
A3232 (thiC)
Enzymes [BR:
vta01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
A3232 (thiC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
SON51198
UniProt:
A0A2N8ZH16
LinkDB
All DBs
Position
A:complement(3389233..3391179)
Genome browser
AA seq
648 aa
AA seq
DB search
MSSRKQARLEAKNFIDSLSVQPYPNSLKTYIQGDRADVRVPVRQISLADSLVGGSKDAPI
FEPNEPIYVYDTSGVYTDPEHDIDLYSGLPKLRESWIEERSDTELLGDVSSVYSKQRLED
ETLDDLRYGNLPKIRRGKPGQCVTQLHYARQGVITPEMEFIAIRENMGRQKYADEQLNIQ
HPGHNFGANLPKEITPEFVRKEVAEGRAIIPSNINHPEAEPMIIGRNFLVKVNANIGNSS
VSSSIEEEVEKLVWSTRWGGDTVMDLSTGRNIHETREWILRNSPVPIGTVPMYQALEKVN
GVAESLNWEVMRDTLIEQAEQGVDYFTIHAGLLLRYVPMTAKRVTGIVSRGGSIIAKWCL
AHHQESFLYTNFREICKICAQYDVALSLGDGLRPGSIADANDEAQFAELRTLGELTKIAW
EYDVQVIIEGPGHIPMHMIKENMDEQLEHCHEAPFYTLGPLTTDIAPGYDHITSGIGAAL
IGWYGCAMLCYVTPKEHLGLPNKEDVKTGLITYKLAAHAADLAKGHPGAQIRDNALSKAR
FEFRWEDQFNLSLDPDTARSYHDETLPQESGKVAHFCSMCGPKFCSMKISHEVREYAKDT
DQVALDQAIEIKMLADPMEGMRQKSQEFKEQGSELYKLAENPSETVES
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtcgtaaacaagcaaggctagaagccaaaaacttcattgattctctttctgta
caaccttacccgaactccctaaagacgtatattcaaggtgatcgagctgatgttcgagta
cctgttcgtcaaatatcgttagctgatagtctagttggcggcagtaaagatgcaccgata
tttgaaccaaatgaacctatctatgtatatgacacctctggtgtgtataccgatcccgaa
cacgatattgacctttatagcggcctgcctaaattgcgtgagagctggatagaagaacgt
tctgatactgaattacttggcgacgtaagttcggtgtatagcaagcaacgtttagaggat
gaaaccttagatgacttgcgctatggcaatctacctaagattcgacgcggtaagcctggt
caatgcgtgactcaattgcattatgctcgccaaggtgtgattacaccagaaatggagttt
atcgcgattcgcgaaaatatgggtcgtcagaagtacgctgatgagcagcttaatattcaa
caccctggtcataattttggtgccaatttacctaaggaaatcacgccagaattcgttcgt
aaagaagtggctgaagggcgcgcaattattccatcgaatattaaccacccagaagcagaa
ccgatgattattggtcgaaatttcttggtgaaagttaatgccaacattggtaattcatcg
gttagctcttcaattgaagaagaagtagagaaactggtttggtctacccgttggggtggc
gataccgtaatggacttatcaacgggtcgaaacatccatgagactcgtgagtggatatta
cgaaacagcccagtaccaattggtacggtgcctatgtatcaagcccttgaaaaggtgaac
ggtgttgcggaaagcctcaactgggaagtcatgcgagacacgctgatcgaacaagcagag
cagggtgttgattactttaccattcatgctggtttgttattacgttacgtaccaatgacg
gcaaaacgggtgacgggcatcgtctctcgcggcggttctattattgcgaagtggtgtttg
gcgcatcatcaagaaagcttcctttacactaactttcgagagatttgtaagatttgtgct
caatatgatgtggcactttctctgggtgatgggcttcgtcctggctctatcgcagatgcg
aacgacgaagctcagtttgctgaattacgcacactgggtgaactaaccaaaatcgcatgg
gagtacgacgttcaggttatcattgaagggcctggtcacataccgatgcacatgatcaaa
gaaaacatggacgagcaattagagcactgtcatgaagctcctttctatacgttgggtcca
ttaacaacggatattgctcctggttacgaccacatcacctcaggtattggtgctgcgtta
attggttggtacggatgtgccatgctttgttatgtaacgccgaaagaacacctgggtttg
cctaataaagaagatgttaaaacgggtttgattacctataagctggctgctcacgcggct
gaccttgcgaaaggccacccgggggctcaaattcgagataatgcgttatctaaagcacgt
tttgaatttagatgggaagatcagttcaacttatctctagacccagatacagctcgttca
tatcacgatgaaactctacctcaagaatcaggcaaagtggctcacttctgttcgatgtgc
ggccctaaattttgctcaatgaagatctctcacgaagtgcgtgaatacgccaaggatacc
gaccaggtggccttggatcaggcgatagaaatcaaaatgctcgcagatccaatggaaggt
atgcgccagaaatcccaagagtttaaagagcaaggatctgagctctataagctggcagaa
aatccgtccgagacagtagaatcataa
DBGET
integrated database retrieval system
