Vibrio tapetis subsp. tapetis: A3306
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Entry
A3306 CDS
T05424
Symbol
rsmB
Name
(GenBank) 16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
vta
Vibrio tapetis subsp. tapetis
Brite
KEGG Orthology (KO) [BR:
vta00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vta03009
]
A3306 (rsmB)
Enzymes [BR:
vta01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
A3306 (rsmB)
Ribosome biogenesis [BR:
vta03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
A3306 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
FtsJ
Methyltransf_25
Methyltransf_37
Methyltransf_31
B2-adapt-app_C
Methyltransf_5
MTS
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
SON51267
UniProt:
A0A2N8ZH97
LinkDB
All DBs
Position
A:complement(3466837..3468123)
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AA seq
428 aa
AA seq
DB search
MNVRAAAANVLFQVVDKGHSLSHALPAAQKTIKPRDHALLQEICYGALRYLPRLESIANE
LMDTPLKGKQRVFHHLILVGIYQLSFMRIPAHAAVGETVEATETLRGPRLKNLINAVLRN
YQRSQEQLDEISVSHSAGKYGHPGWIMKSLQAAYPDKWESIVEANNQKAPMWLRVNRQHH
TRDEYMELLKNENIECVAHSKAKDAIKLAAPCDVMTLPGFDKGWVSVQDAAAQLSVDFLA
PQDGELILDCCAAPGGKTAHILEHTNDTEVVAIDCDVNRLDRVYDNLDRLQLKADVICGD
ARYPEEWWTGGQFDRILLDAPCSATGVIRRHPDIKWLRRASDIEALAELQSEIFDAMWRQ
LKPGGTMVYATCSVTPQENRDQVIAFLKRTEDAQLEGSDPENPGYQILPGDEDMDGFYYA
VLTKRADS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgaatgttcgcgcagcagcagcaaacgtacttttccaagtggtagacaaaggccactct
ctttctcacgctcttccagcggcgcagaaaaccatcaagccacgtgatcacgcgttgctt
caagagatctgttacggtgctctgcgttatttacctcgcttagaatccattgccaatgaa
ttgatggacaccccattaaaaggtaaacagcgcgtattccatcacctaatcttggtgggt
atttatcaactcagcttcatgcgaatcccagctcacgcagcggtgggtgaaacagttgaa
gcaacagaaaccctacgtggtcctcgcttaaagaacctaattaatgcggtactacgtaac
taccaacgtagccaagaacaattagacgaaatttcggttagccacagtgctggcaaatat
ggtcaccctggttggataatgaagtcactacaagcagcttaccctgataagtgggaaagc
attgtagaagccaataaccaaaaagcaccaatgtggttacgtgtgaaccgtcagcaccat
actcgtgatgagtatatggaactgcttaaaaacgaaaacattgaatgcgtcgcgcattct
aaagcaaaggacgccataaaattggccgcgccttgtgatgtcatgacgctaccgggtttt
gataaaggctgggtatcggttcaagatgcagccgctcagctgtctgtagacttcttagca
ccacaagatggcgagctaatcctagattgttgtgccgctccaggcggtaagactgcgcac
attcttgaacacaccaacgacactgaagtggttgcgattgattgtgacgtgaatcgttta
gatcgcgtctacgacaacctagatcgcctacaactaaaagctgacgtaatttgtggcgac
gctcgttaccctgaagagtggtggactggcggtcagtttgaccgaattttactggatgct
ccatgttcagccactggcgtaatacgtcgtcacccagacatcaaatggctacgtcgtgct
tctgatattgaagcgttggctgaattacaaagtgaaatctttgatgccatgtggcgccag
ctgaaaccaggtggcactatggtgtatgcgacctgctcggtaactccacaggaaaaccgc
gaccaagtgatcgccttcctaaagcgcactgaagatgcacaactagaaggctctgatcct
gaaaacccaggctaccagattctacctggcgatgaagatatggatggtttctactacgca
gtcctaactaagcgtgcagacagctaa
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