Vibrio tapetis subsp. tapetis: B0920
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Entry
B0920 CDS
T05424
Symbol
ycfS
Name
(GenBank) putative L,D-transpeptidase YcfS
KO
K19236
L,D-transpeptidase YcfS
Organism
vta
Vibrio tapetis subsp. tapetis
Pathway
vta01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
vta00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
B0920 (ycfS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
vta01002
]
B0920 (ycfS)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vta01011
]
B0920 (ycfS)
Peptidases and inhibitors [BR:
vta01002
]
Cysteine peptidases
Family C82
B0920 (ycfS)
Peptidoglycan biosynthesis and degradation proteins [BR:
vta01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
B0920 (ycfS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Ldt_C
LysM
LysM3_LYK4_5
Motif
Other DBs
NCBI-ProteinID:
SON52531
UniProt:
A0A2N8ZKU2
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All DBs
Position
B:935988..936875
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AA seq
295 aa
AA seq
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MTALTLFCHVSTAATFTLPEEGSRLAGKLQRYIVEEGDTFALIAKRYDVGFLSLMAANRG
IDPFLPTAGSVLIIPSQFVLPDAPYEGIVINLPELRLYYFPKDSGVVHIFPVGIGRVGRD
TPEMLTRISVKIPNPTWTPPKSIRKEYLEKGIELPGVVPAGPDNPLGNYALRLAYGSGEY
LIHGTNKEFGIGLRVSAGCIRMEPKDIEWLFSQAHKGEKVRVINQPIKMTLEPDRSVFME
VHEPLTNSKGVQEPLVMPLELGWWLDEFGMSDAKARAAIQVQNGVPIEIATPPNL
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atgacggcattgacgctgttttgccacgtcagcacagcggctacgttcacattacccgaa
gaaggcagtcgcttagccggtaaactacaacgttatattgttgaagaaggcgataccttt
gcattaatagcaaaacgttatgatgtcggcttcttgtctttgatggcagcaaatagaggt
attgacccatttttgccaactgcaggatcagtgctgatcatcccatctcagtttgttcta
cccgacgcaccatacgaagggattgtgattaatctccccgaactgcgcctctactacttt
cctaaagacagtggcgtggtccatattttccctgtcggcattggccgagtagggcgtgat
accccggaaatgctgactagaatttcagtaaaaattcctaaccccacctggacgccacca
aaatctatccgcaaagagtaccttgaaaaaggcatagagcttcctggtgtggtacccgct
ggacccgataatcccttgggtaattacgcacttcgtttggcgtatgggtcgggtgaatac
ctgatacatggtacgaataaagagtttggtatagggctacgcgttagtgccggttgtatc
cgtatggaaccaaaagatatcgagtggttgtttagccaagcccataagggtgaaaaagtc
cgagtgattaaccaaccgattaaaatgacattggagccagatagaagcgtgtttatggaa
gtgcatgaacctctgaccaacagcaaaggagtgcaggagcccttggttatgcctttagag
ttaggttggtggttagacgaatttggaatgtcagatgcgaaagcacgagcggcaatacag
gtacaaaatggcgtgccaatcgaaattgccacgccacctaatctttga
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