Vibrio tapetis subsp. tapetis: B1441
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Entry
B1441 CDS
T05424
Name
(GenBank) putative Ada, Adenosine deaminase domain fused with AlkA, 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
vta
Vibrio tapetis subsp. tapetis
Pathway
vta03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B1441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vta03000
]
B1441
03400 DNA repair and recombination proteins [BR:
vta03400
]
B1441
Enzymes [BR:
vta01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
B1441
Transcription factors [BR:
vta03000
]
Prokaryotic type
Helix-turn-helix
AraC family
B1441
DNA repair and recombination proteins [BR:
vta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B1441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
TetR_N
Motif
Other DBs
NCBI-ProteinID:
SON53052
UniProt:
A0A2N8ZMF0
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Position
B:1481564..1482934
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AA seq
456 aa
AA seq
DB search
MEDQKTKMSQEECQRARTARDARFDGKFYVAVKTTKIFCRPICPANLPLEKNVEYFHDKA
QALQSGYRPCLRCRPDSAPSSWAWKGTEVSFQRAVKMIEQGDLHNTTLALLAERLGITDR
YLRQLFDKYMGMSPKQYAQYHQLMFAKQLLHTSSMTITDIAFASGFNSVRRFNDAFKKLL
RLSPSQIRKTNLNDQKTNQIQLAFQGQLNWHHMLNFYRLRAIDTVERVGDNSYQRTFTLN
GTSGWFKASMETNNALTVEFDIAEPSQLKALVVRLRRMFDLDTNVLDIEAQLSQLAPDLI
TESGIRIPGLWNEWEAGVRAILGQQVSVKAAINQLNVLVEQCADQVDGKMVFPSAETVST
VDLSFLRMPQSRKDTLARFAQFMLENPHAPARDWIELKGIGPWTINYAQMRGSSQPDLFL
DNDLVVKKAMTKWPELNKTDVAPWGSYATLHCWNNA
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggaagatcaaaaaacgaaaatgagccaagaggaatgtcaacgagcgaggacagcaaga
gacgcgcgttttgatggtaaattttatgtcgcagtgaaaacaaccaagattttttgtcgc
cctatctgcccggcgaatcttcctctggagaaaaatgttgagtattttcatgataaagcg
caagcattgcagtcggggtatcgtccttgcctacgttgccgacccgacagcgcaccgagt
tcttgggcttggaaaggcacggaagtttcctttcaaagagcagtaaagatgatagaacaa
ggtgacttacacaatacgaccctagcgctattggccgaaagactgggtattaccgatcgg
tacttacgccagctgttcgacaaatacatgggtatgtcaccaaagcaatacgctcagtac
caccaactcatgtttgccaagcagttactccataccagcagtatgacgattaccgatatt
gcctttgctagtggttttaatagtgttagacgttttaatgatgcatttaaaaaacttcta
cgcctttcaccaagtcagatacgaaaaacaaacctgaatgaccagaaaacgaatcaaatt
caattggcttttcaggggcaactgaactggcatcatatgctgaatttttatcgcttgagg
gcaattgacactgttgaacgtgttggagataacagttatcagcgcacctttacgcttaat
ggtacctcggggtggtttaaggcaagcatggaaacaaataatgcactaactgtggagttt
gatattgccgaaccatcacagttaaaagcgttagtggtaaggctgagaagaatgtttgat
ttagacacgaatgtattggatattgaagctcaattaagtcagttagctcccgacttaatt
acggaatcgggcattcgaattccgggactgtggaatgagtgggaagccggagttagggcg
atattaggccagcaagtctcagtaaaagcggcaattaatcaattgaatgtcttggtagag
cagtgtgcggatcaagtggacggaaaaatggtttttccgagtgctgaaacggtatcaact
gtggatctgtcctttttgcgaatgcctcaaagtcgcaaagatacgttagctcgatttgcc
cagtttatgcttgagaaccctcatgctccagctcgcgattggatcgagctaaaaggcatc
ggcccttggacaataaattacgcgcaaatgcgtggttcatctcagcccgatctatttcta
gataacgacttagtggtcaaaaaagcgatgaccaagtggcccgaactaaacaaaacggat
gtagctccttgggggagttacgcaacactgcattgctggaataatgcgtga
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