Vibrio tapetis subsp. tapetis: B1488
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Entry
B1488 CDS
T05424
Name
(GenBank) ATP-dependent DNA helicase pcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vta
Vibrio tapetis subsp. tapetis
Pathway
vta03420
Nucleotide excision repair
vta03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vta00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B1488
03430 Mismatch repair
B1488
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vta03400
]
B1488
Enzymes [BR:
vta01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B1488
DNA repair and recombination proteins [BR:
vta03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B1488
MMR (mismatch excision repair)
Other MMR factors
B1488
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
Viral_helicase1
UvrD_C_2
PhoH
Motif
Other DBs
NCBI-ProteinID:
SON53099
UniProt:
A0A2N8ZMK1
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All DBs
Position
B:1525762..1527972
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AA seq
736 aa
AA seq
DB search
MAQFTEEQKSIIKHREGNALCLAGAGTGKTTTLVGVYQAQTRLVPEQSIQVLMFNKTICD
DFRSKLLDKGYNPHRTVKTYHGFCQELLTRQGLGSRLVFEPMRRTQLIRTVLQKMALSCR
LPTTKRLLKKPKTVAVLESFISLVKAIGLSEDEVFEAQNYGEEYDFLLDAYKVVEQERLR
SGLLFFDDWLIESVKLLSEDLEFRARIQQSIQLVIVDEFQDTNPVQLKLLKLIVADGARI
MAVGDINQCIYRWRGSEPSIMLRFVQEFPPCTTYKLSHTFRFGHSLAIAADHLISHNKER
FKDFCTVPAQSVEDTQIEHIKTSTIASHVVKAVKGQLEEGCESGEIAVLVRRWSQAMLIE
LAFIKANVPYMAPEGSTLAKSREVKLLLQLMNLVIRWHEHQKIDSQILQELFSYPHCYLR
GEILQPLCRALASVPPTSWVREIDKFSAANKRKDQNFDNAIERVTLIRSLLKKDMKARQI
FEEYRAGSDLDHWLRKSEATEGDVEESLDKLNALTAVLKGLNYDCNQAKDFFESTQQRAA
QSSKKSDGVRLTTIFRAKGCEYNNVHLPFWDRGIFPTEAKFDTGQGPDYEEERRVAYVAV
TRAKQRAKIYTGDSPSPFVSESYLPLAHAFGPSLYKEQSLPYFETEALELYLTQLGRVDD
CAEAPKKPLNTRLRDNNRSQSTEEGVAAVGDRVRHIQGDKGTITNISGPKFTVKYDSNKS
HQYQMVMFSRFFDLIG
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaatttaccgaagaacaaaaatcaataatcaaacaccgtgaaggcaatgcgttg
tgtttagcgggcgcaggaacaggtaaaaccaccacgcttgttggtgtttatcaggcacaa
acccgcctggtgcctgagcaaagtattcaagtgctcatgtttaataaaaccatttgtgat
gattttagaagcaagctattagataagggatataacccgcaccgaacggttaaaacctat
cacgggttttgtcaggaactactaacacgtcaagggcttggttctaggttggtgtttgag
cccatgcgccgcacacagctcattagaaccgtcctgcaaaaaatggcgctgagttgtcgt
cttccaaccactaaacgcttactcaaaaagcctaaaactgtcgccgtgctggaaagcttt
attagcttggtaaaagccattgggctgagtgaagacgaggtcttcgaggcgcaaaactat
ggcgaagaatatgattttttgctggacgcctataaagtggtcgagcaagaaaggttgcgc
tctggattactgtttttcgatgattggttaatcgaatcggtaaagcttctctcagaagat
ttggagttccgagcgcgaattcagcaatcaattcagctcgttattgtcgacgaatttcaa
gacactaacccagttcaacttaagcttctcaagcttattgtggcagacggcgcacggatc
atggctgtgggcgatattaaccaatgtatctataggtggcggggcagtgagccttccatc
atgctgcgattcgttcaagagtttccaccttgtaccacttacaaactgagtcataccttt
cgatttggccatagtttagcgattgctgcagatcatttgattagccataacaaagaaaga
ttcaaagatttttgtaccgtgcctgctcaaagtgttgaagacacgcagatagagcacata
aaaacctcgaccattgcctcgcacgtggtgaaggcggtgaaaggtcaattagaggaaggc
tgcgaatccggtgaaatagccgtcttggttaggcgttggtcacaagccatgctgattgaa
ttggcgtttatcaaagcgaatgtgccgtacatggcaccggagggcagtacgctggcgaaa
agccgcgaggttaaacttctactgcagttaatgaacttagttatccgctggcatgaacac
caaaagatagacagccagatactgcaagaactgttcagttatcctcattgctatttgcgt
ggcgagatcctacagccactttgtcgtgcactggctagcgttccaccaaccagttgggtt
agggaaattgataaattttcggctgccaacaaacgtaaagatcaaaattttgataacgcg
attgaacgagtcacattgatacgttcattacttaaaaaagacatgaaagctcggcagatc
tttgaagaatatcgagccgggtcggatctggatcattggttaagaaagtctgaagccact
gaaggcgacgttgaagaaagcttagataagctcaacgcattaacggcggtactgaaaggt
ttaaattatgactgtaaccaagccaaagacttttttgaaagcacgcagcaaagagcggct
caaagttcgaagaaatcagacggtgtgcgtttaaccacgatatttagagcgaaaggctgc
gaatacaacaatgtgcatttacccttctgggatagaggcatattcccgacggaagcgaaa
ttcgatacaggacaagggccagattacgaagaggaacgtcgcgttgcgtatgttgcggtt
acccgagcgaagcagagagccaaaatctacactggtgattcaccgagcccgtttgtgtcc
gagtcttatctgccgttggcacacgcattcgggccaagtttatacaaagaacagagccta
ccgtactttgaaaccgaagcgcttgaattgtatttaacgcaattgggccgagttgatgat
tgcgccgaagcgcctaaaaagccgcttaatactcggctaagagacaacaatcgtagccaa
tcaaccgaggaaggagtggcagcggtaggagacagagttcgacatattcaaggtgataaa
ggcactatcaccaacatctctgggccgaaatttaccgtgaaatacgattccaataaatcg
catcaatatcaaatggtgatgttcagtcgattttttgatttaatcggttag
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