Vibrio tapetis subsp. tapetis: B1553
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Entry
B1553 CDS
T05424
Symbol
gcvP
Name
(GenBank) glycine decarboxylase, PLP-dependent, subunit (protein P) of glycine cleavage complex
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
vta
Vibrio tapetis subsp. tapetis
Pathway
vta00260
Glycine, serine and threonine metabolism
vta00630
Glyoxylate and dicarboxylate metabolism
vta00670
One carbon pool by folate
vta00785
Lipoic acid metabolism
vta01100
Metabolic pathways
vta01110
Biosynthesis of secondary metabolites
vta01200
Carbon metabolism
Module
vta_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
vta00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
B1553 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
B1553 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
B1553 (gcvP)
00670 One carbon pool by folate
B1553 (gcvP)
Enzymes [BR:
vta01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
B1553 (gcvP)
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Gene cluster
GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Beta_elim_lyase
Aminotran_5
DUF7572
RNase_H2-Ydr279
Motif
Other DBs
NCBI-ProteinID:
SON53164
UniProt:
A0A2N8ZMK6
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Position
B:complement(1595099..1597963)
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AA seq
954 aa
AA seq
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MTELLQHLSTDNEFIGRHNGPNDSEQQQMLAAINAVSMDALIEETVPAQIRLETPMNTAP
AMSEADMLTVMKQFANQNQIKRTFIGQGYYNTFTPNVILRNVLENPGWYTAYTPYQPEIS
QGRLEALLNYQQMVMDLTGMEIANASLLDEATAAGEAMTLCQRAGKSKSNVFFVADDVHP
QTLEVVKTRAEFIGFEVVTGSVDSLPEHDVFGALLQYPGTTGEVRDLSDVIAQAQAKKTL
VTVATDLLASALLKPAGEMGADVVIGSAQRFGVPMGYGGPHAAFMATKEKHKRTMPGRVI
GVSIDTKGNQALRMAMQTREQHIRREKATSNICTAQALLANMASFFAVYHGEEGLRTIAR
RTHHMTAILAAGLTKSGYELAHNSFFDTLTINTGDKSQALYQKAQSADINLRNLNTQLGI
SFDETTTIADIDALFAVFGVNENAKALSTDISSNELAAIPETLRRETRYLTHPVFNTHHS
ETQMMRYLKKLENKDFSLTHGMIPLGSCTMKLNAAAEMIPVTWPEFGSIHPFAPLEQAAG
YTALAQDLKEKLCEITGYDDFSLQPNSGASGEYAGLIAIQRYHQSRGEGHRNVCLIPSSA
HGTNPATASMVSMKVVVVKCDEDGNIDMTDLAAKIEKHQENLSSIMITYPSTHGVYEEQV
QEVCEMVHAAGGQVYLDGANMNAQVGLTSPGFIGSDVSHLNLHKTFCIPHGGGGPGMGPI
GVKSHLAPFLPGHVENGVVGEDYAVSAADLGSASILPISWAYIAMTGSEGLTDATKVAIL
NANYVMERLRPHYPVLYRGTNGRVAHECIIDIRPLKEDTGISEEDIAKRLMDYGFHAPTM
SFPVAGTLMVEPTESEDLAELDRFCEAMIAIRNEMNKVKNGEWPLEDNPLVNAPHTQVDL
SSAEWAHPYSREEACFPSAQTKASKYWPTVNRVDNVYGDRNLICSCPSIDNYED
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgacagagctacttcaacacctaagcacggataacgaattcatcggtcgccataacgga
cctaatgattcagagcaacaacaaatgcttgcagcgattaacgcagtaagtatggacgcc
cttattgaagaaaccgtcccggctcaaattcgtctagaaacaccaatgaatacggctcct
gcaatgagcgaagccgacatgctgactgtaatgaaacagtttgcgaaccaaaatcagatc
aaacgtactttcattggccaagggtattacaataccttcacgccaaatgtcatcttacgt
aatgttcttgaaaacccaggatggtacacggcgtacacgccataccaaccagagatctca
caaggtcgccttgaagccttgctcaattaccaacaaatggtgatggatcttacagggatg
gaaatcgcaaatgcttctcttcttgatgaagcaacagcagccggcgaagccatgacttta
tgtcagcgtgctggaaaaagtaaaagcaacgtgtttttcgttgctgatgacgttcatcca
caaacgttagaagttgtaaaaacacgcgctgaatttattggttttgaggtggtgactggc
tctgtcgattccttgccagaacacgatgtatttggtgcattattgcaataccctggtacc
acaggtgaagtgcgcgacttaagcgacgttattgcacaagcacaagcgaaaaaaacacta
gtaaccgttgcaaccgacctactcgcctctgctttattgaaacctgcaggtgaaatgggc
gcagatgttgtaatcgggagtgcgcaacgttttggtgtccctatgggctacggcggtcct
cacgctgcgttcatggcaaccaaagaaaaacataagcgaaccatgcctggccgtgttatc
ggtgtatctattgataccaagggtaaccaagctcttcgcatggcaatgcaaactcgtgaa
caacatattcgccgtgaaaaagcgacatcgaatatctgtactgctcaagcattactggcc
aacatggcttcattcttcgcggtgtatcacggtgaagaaggtttgcgaactatcgctcgt
cgtacgcaccacatgacggcaattctagcagctggcctgaccaaatctggttacgaactg
gcgcacaacagcttcttcgatacgttaaccattaatacgggtgacaagtcgcaagcgtta
tatcaaaaagcacaaagtgcagacatcaacctgcgtaacctgaatactcaattgggtatc
agctttgatgaaaccacgacgatagccgatattgacgctctatttgctgtgttcggcgta
aatgaaaacgctaaagcgctttcaacagatatcagttctaatgagttggctgcgattcca
gaaacacttcgtcgcgaaactcgttacctaacccatccagtattcaatacgcatcacagt
gaaacacaaatgatgcgttaccttaagaagctggaaaataaagacttctctttaactcac
ggtatgatcccactaggaagctgtaccatgaagttgaatgcggcagctgaaatgatccct
gtgacttggcctgaatttggttcaattcacccgttcgcaccattagaacaagcggcgggc
tacactgcccttgcgcaagatctaaaagaaaaactgtgtgaaattacgggctacgacgat
ttctcactgcaacctaactctggtgcttctggtgaatacgcaggtttgattgcgattcaa
cgttaccaccaaagccgcggtgaaggtcatcgtaatgtctgtttgatcccaagctctgcg
cacggtacaaaccctgctacggcctctatggtatcaatgaaagtagttgtggttaaatgt
gatgaagatggcaacatcgacatgactgacctagctgccaagattgagaagcatcaagag
aacctatcaagcatcatgatcacttatccatctactcacggcgtgtacgaagaacaagta
caagaagtgtgtgaaatggttcatgctgctggcggtcaagtttaccttgatggtgctaat
atgaatgctcaagttggccttactagcccaggcttcatcggctcagacgtatcgcactta
aacctacacaaaacgttttgtattccacatggtggcggcggtcctggtatggggccaatc
ggtgtaaaatcacacctagcgccgttcttgccaggtcacgttgaaaatggtgttgttggt
gaagactatgccgtttcagccgctgatttaggcagtgcgtctatcttgccgatatcttgg
gcttacatagcgatgaccggcagcgaaggattaactgacgcgacgaaagtagcgattctg
aatgctaactacgtcatggagcgcctacgcccacactaccctgttctgtaccgtggtact
aatggacgcgttgcgcacgaatgtattatcgacattcgtccgctaaaagaagacacaggt
atcagtgaagaagacatcgctaagcgtttaatggattacggtttccacgcgccgactatg
tcattcccagtggctggcacactcatggtagaaccaacagaatctgaagatcttgccgag
ctagatcgcttctgtgaagccatgattgccattcgcaacgaaatgaacaaagtcaaaaac
ggcgaatggccactagaagacaacccgcttgtaaacgcaccgcacacacaagttgacctt
tcaagtgcagagtgggcacacccatactcacgtgaagaagcctgtttcccaagcgcacaa
accaaagcgtctaagtactggccgacagtaaaccgtgtcgacaacgtttacggcgaccgt
aacctaatctgttcatgccctagcattgataactacgaagactag
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