Vagococcus teuberi: BHY08_00700
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Entry
BHY08_00700 CDS
T04578
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
vte
Vagococcus teuberi
Pathway
vte03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BHY08_00700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vte03019
]
BHY08_00700
03009 Ribosome biogenesis [BR:
vte03009
]
BHY08_00700
Enzymes [BR:
vte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BHY08_00700
Messenger RNA biogenesis [BR:
vte03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BHY08_00700
Ribosome biogenesis [BR:
vte03009
]
Prokaryotic type
rRNA helicases
BHY08_00700
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
DeaD_dimer
CMS1
Motif
Other DBs
NCBI-ProteinID:
APB30471
UniProt:
A0A1J0A3H0
LinkDB
All DBs
Position
146865..148409
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AA seq
514 aa
AA seq
DB search
MKFSELQLEKSLLQAIENIGFEEATPVQSATIPLALEGKDVIGQAQTGTGKTAAFGLPML
NKIDPNRPELQGLVIAPTRELAIQTQEELYRLGKEKKIKVQSVYGGADIGRQIRALKNKP
HIVVGTPGRLLDHINRRTLKLDTVETLVLDEADEMLNMGFLDDIEAIISKVPAERQTLLF
SATMPDSIKRIGVKFMQDPEHVRIKAKEMTANLIDQYYVRCKEFEKFDIMTRLFDVQSPE
LTIVFGRTKRRVDELARGLEMRGYKAEGIHGDLPQHKRMSILKAFKNGELDILVATDVAA
RGLDISGVSHVYNYDIPQDPESYVHRIGRTGRAGKEGMSVTFVTPNEMGYLHVIEDLTKK
RMTPLRPPSKKEAVEGQIGAAITEIKDLLAANGLEKYQLAASDLLEDYTAEDLVALLIKQ
ISKDDAAEVPVKITPERPLPNRRGNNKNGGRGKGGNYSRRNNNKGGGRGKEQYNKKKRYN
NSDAPKKNNNNKSNNKPSQKKDGGRGFVIRNNDK
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
ttgaaatttagtgaattacagttagaaaaaagcttattacaagcaatcgaaaatattggg
tttgaagaagcaacgcccgtacaaagtgccacaattccattagctttagaaggaaaagac
gttattggtcaagcacagacaggtactggtaaaacagccgcttttgggttaccgatgtta
aataaaattgaccctaatagacctgagttacaaggattagttattgcaccaacacgtgaa
ttagctattcaaacacaagaagaattataccgtttaggtaaagagaaaaaaattaaagtt
caatcagtttatggtggagcagatattggtcgacaaattcgtgcgttaaaaaacaaacca
catattgttgtgggaactcctggccgtttattagaccatattaaccgtcgtacgttgaaa
ctagatacagtggaaacacttgtattagatgaagctgatgaaatgttaaatatgggattc
ttagatgatatcgaagccatcatctcaaaagttccagcagaacgccaaacattattattc
tcagcaacaatgccagattcaatcaaacgtattggggttaaattcatgcaagaccctgaa
catgttcgtatcaaagcaaaagaaatgacagctaacctaattgatcaatattacgttcgt
tgtaaagaatttgagaaatttgatattatgactcgtttgtttgatgtacaatcacctgag
ttgacaattgtttttggtcgtacaaaacgtcgcgtcgacgaattggctcgtggacttgaa
atgcgtggttataaagcagaaggtatccatggagacttaccacagcacaaacgtatgagt
attttaaaggcctttaaaaatggcgaattagatatcttagttgcaacagacgtggcagct
cgtggattagatatttctggtgtgagtcatgtttacaactatgatattccacaagatcca
gaaagttatgttcaccgtatcggtcgtacaggtcgtgctggtaaagaaggtatgtcagta
acatttgttacacctaatgaaatgggttatctacatgtcattgaagacttaacgaaaaaa
cgtatgacaccacttcgtccaccttctaaaaaagaagcagtagaaggacaaattggtgca
gcgattactgaaattaaagatttattagcagctaatggtttagaaaaatatcaattagca
gcaagtgatttattagaagactacacagcagaagatttagtggcgttgttaattaaacaa
atttctaaagatgatgcagctgaagtccctgtaaaaattacaccagaacgcccattacca
aaccgtcgtggtaataataaaaatggtggtcgtggtaaaggtggtaactatagccgtcgt
aacaataataaaggtggcggacgcggaaaagagcaatataacaagaaaaaacgctataac
aattctgatgcacctaaaaaaaataataacaacaaatcaaacaacaaaccatcacagaaa
aaagatggtggccgtggatttgttattcgtaacaacgataaataa
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