Vagococcus teuberi: BHY08_06200
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Entry
BHY08_06200 CDS
T04578
Name
(GenBank) hypothetical protein
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vte
Vagococcus teuberi
Pathway
vte03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BHY08_06200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vte03019
]
BHY08_06200
03400 DNA repair and recombination proteins [BR:
vte03400
]
BHY08_06200
Enzymes [BR:
vte01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BHY08_06200
Messenger RNA biogenesis [BR:
vte03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BHY08_06200
DNA repair and recombination proteins [BR:
vte03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BHY08_06200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
Putative_PNPOx_2
Motif
Other DBs
NCBI-ProteinID:
APB31455
UniProt:
A0A1J0A6B4
LinkDB
All DBs
Position
complement(1285873..1287321)
Genome browser
AA seq
482 aa
AA seq
DB search
MMLETFLKQRFQFDTFRKGQKETIQSIVEGKSVLSILPTGAGKSLCYQFPSYYVNKGQTV
IVSPLISLMEDQVSLLRRNGEKSVIAINSLLEKRSRRFVLNRLNQYRFIFISPEALSQEE
VLSYFEKLTISLFVVDEAHCISQWGHDFRPSYLALKDIKQRLGNPLTLALTATATEDVKR
DIAQQLFESETFVEVAQSVNRENIYYDVVETDDKLSYLEDFLMEREVPGIIYFSSKKEAD
RVSQYLNNCLPYTVQSYHSDMSSEDRIRIQEQFIHDNIRILCATSAFGMGINKGNIRFVI
HYHLPNSLEDFVQESGRAGRDGKQSLSIVLYQSGDENIHFFLQEQTHQEKQDLLFLENKS
QIDRQKFSEVMTKTQKKWLQQIEENQTTWEDYKQTLMTKKRQRELKLYKMIEYCQSSECK
RDIIQHYFGESKSGDLTCCCHICQTERPEVNIDKVSQKRVETSLNVKDKLEKMFFLGVSS
DI
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgatgttagagacctttcttaaacaaagattccaatttgacacgtttcgcaagggtcaa
aaagaaacgattcaatctattgtagaggggaaatctgttttatcgattttgccaacaggt
gcagggaaatcattgtgctatcaatttcctagttattatgtaaataaaggacagacggtg
attgtatcaccacttatttcattgatggaagatcaagtgtccttactaagacgaaatggt
gaaaaatcggttatcgcgattaatagtctattagaaaaacgttcgcgccgatttgtatta
aatcgactcaaccagtatcggtttatttttattagtccagaagcgttgagtcaagaagag
gtattgtcctattttgaaaagctaacgattagtttgtttgtagtcgatgaagcacattgt
atttctcagtgggggcatgactttagaccgagttatctggctttaaaagatattaagcaa
cgattaggaaaccctttaacgttagctttaacggcgacagcaactgaagacgtaaaacgt
gatatcgcacaacagttatttgaatcagaaacatttgtcgaggttgctcaatccgttaac
cgtgaaaatatttattatgatgttgttgaaacggatgataaattaagttacttggaagac
tttttaatggaaagagaagtgccggggattatttatttttctagtaaaaaagaagccgat
cgcgtctctcaatatctgaataattgcttaccttatactgttcagagttatcattcagat
atgtcgagtgaggatagaatcagaattcaggagcagtttattcatgataacatccggatt
ttatgtgcaacaagtgcgtttggtatgggaattaataaaggaaatattcgctttgttatt
cattaccacttaccaaatagtttggaagattttgttcaagagtctggtcgagcaggtcgt
gatggaaaacaaagtttgtcgattgtgctataccaatcaggtgatgagaacatacatttc
ttcttgcaagagcaaacgcatcaagaaaaacaagatttacttttcttagaaaacaagtca
caaattgataggcaaaaattttctgaggtaatgacaaaaacgcaaaaaaaatggttacaa
caaatcgaagaaaatcaaacaacttgggaagattataaacaaacattaatgacaaaaaaa
aggcaacgagagttaaagctttataaaatgattgaatactgtcaaagtagtgagtgtaaa
cgtgatataatacaacactatttcggtgaaagtaaatcaggggatttaacatgttgttgt
catatttgtcaaacagaaagaccagaagttaatatagataaagttagtcaaaaaagagtt
gaaacgtctttaaatgtaaaagataaattagaaaaaatgttttttttaggtgtttcaagc
gacatataa
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