Vagococcus teuberi: BHY08_08350
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Entry
BHY08_08350 CDS
T04578
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
vte
Vagococcus teuberi
Pathway
vte03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vte00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BHY08_08350
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vte03019
]
BHY08_08350
03016 Transfer RNA biogenesis [BR:
vte03016
]
BHY08_08350
Enzymes [BR:
vte01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BHY08_08350
Messenger RNA biogenesis [BR:
vte03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BHY08_08350
Transfer RNA biogenesis [BR:
vte03016
]
Prokaryotic type
tRNA degradation factors
BHY08_08350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
OB_RRP5_4th
SPATA25
KH_2
Motif
Other DBs
NCBI-ProteinID:
APB31825
UniProt:
A0A1J0A7D4
LinkDB
All DBs
Position
complement(1749582..1751738)
Genome browser
AA seq
718 aa
AA seq
DB search
MHSEKRVFETTWGGRPLSVEIGQLAKQANGAVLVRYGDTVVLSVAVASKQAKDVDFFPLT
VNYEEKMYAVGKVPGGFIKREGRPSETATLTARLIDRPIRPMFAEGFRNEVQITNTVMSV
EQDCSPEMAAMLGSSLALCVSDIPFNGPIAGVEVGFVDGEYVINPTVEQAEQTTIELSVA
GTKDAINMVESGAKEVSEEDMLGALLFGHEEIKRLVAFQEEIANEIGKEKMEIELLQVDA
DLEKEINDTYMPRMTQAIQTEEKLAREDNISALKDEVIAVYEEKFAEDEESAKWMKEVRQ
ILEDMEKNEVRRLITVEKVRPDGRKIDEIRPLSSEVGILPRVHGSGLFTRGQTQALSVCT
LAPLGEHQIIDGLGVEESKRFIHHYNFPQYSVGSTGPMRSPGRREIGHGALGERAMAQVI
PNEQEFPYMIRVVSEVLESNGSSSQASICAGILALMDAGVPIKAPVAGIAMGLVMDGDNY
TILTDIQGMEDHLGDMDFKVAGTKDGITALQMDIKIEGITEAILTEALTQAKKARMEILT
ELTSTIAEPRKELSKYAPKIEMIQIKSEKIKDVIGKGGETINKIIEETDVKIDIDQDGNV
SIAHQDQDKINRAIEIIKDLVREVEVGEVYLAKVVRIEKFGAFVNLFKGKDALVHISQFS
HERVNKVEDVVKLGDEILVKVTEIDRQGRVNASRKAMIEKPKEEKKEEKKEETKEKSE
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgcatagtgaaaaacgtgtatttgaaacaacttggggcggtcgtccgctatcagttgaa
atcgggcaattagccaaacaagcaaatggagcagtgttagtaagatatggtgacacagtg
gtattaagtgtcgcagtggcttcaaaacaagcgaaagatgttgattttttcccattaaca
gttaactacgaagaaaaaatgtatgctgttgggaaagtaccaggaggattcattaaacgt
gaaggacgtccaagtgaaacagcaacattaactgctcgtttgattgatagaccaatccgt
ccaatgtttgctgaaggatttcgtaatgaagttcaaattacgaacacagtgatgagtgtg
gaacaagattgctcacctgaaatggcagcaatgttaggttcatctttagctctatgtgta
tctgatattccatttaatggcccaattgctggcgtcgaagttggttttgttgacggtgag
tatgtcatcaacccaactgttgaacaagcagagcaaacaacgattgaattatcagtagct
ggaacaaaagatgccatcaacatggttgaaagtggtgcaaaagaagtatctgaagaagat
atgttaggtgcccttttattcggtcatgaagaaattaaacgtttggttgctttccaagaa
gaaattgccaatgaaatcggcaaagaaaaaatggaaatcgagttattacaagttgatgct
gatttagaaaaagaaatcaatgatacttatatgcctcgtatgactcaagccattcaaaca
gaagaaaaattagctcgtgaagacaatatttcagctttaaaagatgaagtgattgctgtt
tacgaagaaaaatttgctgaagatgaagagtctgctaaatggatgaaagaagttcgtcaa
atcttagaagacatggaaaaaaatgaagttcgtcgcctgattacagttgaaaaagttcgt
cctgatggtcgtaaaattgacgaaattcgtcctttatcatctgaagtaggaattttacca
cgtgtacatggatctggcttatttactcgtgggcaaacacaagctttatcagtttgtaca
ttagcaccacttggcgaacatcaaattattgatggtttaggtgtggaagaaagcaaacga
ttcatccaccattataacttcccacaatactcagttggttcaactggtccaatgagatca
ccaggtcgtcgtgaaatcggacatggtgcattaggtgaacgtgcgatggcacaagtcatt
ccaaatgaacaagagtttccatacatgattcgtgtggtttcagaagtattagaatcaaat
ggttcttcttctcaagcaagtatctgtgcaggaatcttggccttaatggatgctggtgtt
ccaatcaaagcacctgttgcgggtattgcaatgggacttgtaatggatggggataactac
actatcctaacagatatacaaggtatggaagaccacttgggtgacatggactttaaagtt
gccggaacaaaagatggtattacagcattacaaatggatattaaaatcgaaggaattaca
gaagctatcttaacagaagctctaactcaagcgaaaaaagcacgtatggaaattctaact
gaattgacatcaacaatcgctgaacctcgtaaagagttaagtaaatatgctcctaagatt
gaaatgattcaaatcaaatctgaaaaaattaaagatgttatcggtaaaggtggcgaaacc
atcaataaaattatcgaagaaactgatgttaaaattgatatcgatcaagatggtaatgta
agtattgcccatcaagatcaagataaaatcaaccgtgcgattgaaatcattaaagatttg
gttcgtgaagttgaagttggagaagtttacttagcaaaagttgttagaattgaaaaattt
ggggcctttgttaacttatttaaaggaaaagatgccttagtacatatctctcaattctca
catgagcgtgtgaataaagtagaagatgtagttaaattaggtgatgaaatccttgttaaa
gtaactgaaattgatcgtcagggacgtgtcaatgcttctcgtaaagcgatgattgaaaaa
ccaaaagaagagaaaaaagaagagaaaaaagaagaaacaaaagaaaaatctgaataa
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