Vibrio tarriae: CEQ48_02560
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Entry
CEQ48_02560 CDS
T08683
Name
(GenBank) ligand-gated channel
KO
K02014
iron complex outermembrane recepter protein
Organism
vti
Vibrio tarriae
Brite
KEGG Orthology (KO) [BR:
vti00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vti02000
]
CEQ48_02560
Transporters [BR:
vti02000
]
Other transporters
Pores ion channels [TC:
1
]
CEQ48_02560
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
ASK53697
UniProt:
A0AAU8WAN5
LinkDB
All DBs
Position
2:complement(439458..441599)
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AA seq
713 aa
AA seq
DB search
MKLSPVSAAVLSVLAAGFAHAETEPSHYEEVVVTANRIEQPLSEVAGSVAVLEGETLEKQ
GKTELYDALNQEPGVSVTGGAGRPQNITIRGMTGNRIAIVRDGIQSADGYGAADINDKYG
RNTFNLSNVKQIQVVKGASSTLYGSGAIGGVVIIESKAPEDYLYHRDYYVDAALTYSGIS
NRYQGNHALAMRRGDGETLLTIDYWQGEETRNFNQDLYNREVDGYNLGFTHHYWLNDALR
LKTHLEYFDDYAKRREGTSSIQKDDKWDLVSFYEYQRSQTRLASVGADYTANLSWMDTLE
GKLYWRSTENITQTNRLMANDRSGAGILSYRRELRDEGFNDEALGATLNAQKEWQQGEWL
HQFAYGMSVDGHDYQRPKSIRRMESSGDDLQADEPFAPAREYRFGVYGQDNLLLGDWTLA
AGLRFDAQKLSPKNTDRIHGYKVVTMGSSEWSPSASISYQWHPEWNTYLSYNHGFRAPSY
DKAYGASDHSFVPLTPFIIKPNNKLRAETSDSFELGSKYDNGQTQLYVAVFYSIFDNFID
IKQIDYDDTTGSVIQQYQNIAGVKTYGAEMSLVHRLDDRWSVENKLGYVDGKDGENQYVR
TLTPLEGSVQLNYQRDRWDAYSRLNWASAMSRVPTCTTEQGKETECATTTGWVSWDIGLN
YQWNAQLSASFNVVNLLDREYTRYQDVAGVTPSDTRYSTEPGRYFTVHAKYVF
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgaagctttctccagtatcagctgcggtacttagcgtactcgcggccgggttcgctcat
gccgaaactgagcctagccactacgaagaagtggtggtgacggccaatcgcattgagcag
cctttgtcagaagtggcggggtcagtggcagtgcttgaaggggaaacccttgaaaagcaa
ggcaagaccgagttgtacgatgcattgaatcaggagccgggtgtcagcgtgactggcgga
gcgggacgcccacaaaatattacgattcgtggcatgaccggcaaccggatagcgattgtc
cgtgatggtattcaaagtgcggatggttatggtgcagcagacatcaacgataagtatggt
cgtaacacatttaacctgagcaatgtgaaacagatccaagtggtgaaaggcgcaagctca
accctatacggttctggtgcgattggtggcgtggtgatcatcgaaagtaaagcgccggaa
gattatctgtatcaccgtgattattacgtggatgccgcattgacctactcaggcatcagc
aaccgctaccaaggcaatcacgcgttagccatgcgtcgcggtgatggcgagacgctgctc
acgatcgactactggcaaggtgaagagacgcgtaacttcaaccaagatctgtataaccgc
gaagtggatggttacaaccttggcttcacccaccactactggttaaacgatgcgctgcgt
ttaaaaacgcacttagagtattttgatgattatgccaagcgtcgcgaaggcacctcttct
attcaaaaagacgacaagtgggatctggtcagcttttacgagtatcaacgcagccaaacg
cgtctggccagcgttggtgctgattacacggctaatctaagttggatggatacgctggaa
ggcaaactctactggcgcagtacagaaaacatcacacagacgaaccgtttgatggcgaat
gatcggtctggcgctggcatcctctcctatcgccgtgaactgcgtgatgaagggttcaat
gatgaggcattaggagccacgctcaatgcgcaaaaagagtggcaacaaggtgagtggctg
catcagtttgcttacggtatgagcgttgatggtcatgattaccagcgtccgaaatcgatt
cgacggatggaatcttcaggtgacgatttacaagccgatgagccgtttgctcctgcgcgt
gagtaccgttttggcgtctacggacaagacaatctcctcttaggagattggacgctggct
gcgggtttgcgttttgatgcgcaaaaattgagccctaaaaataccgatcgtattcatggc
tacaaagtggtgaccatggggagcagtgagtggtcacccagtgcctcaatctcttatcaa
tggcatccagaatggaatacttatctgagctacaaccacggcttccgtgcgccaagttat
gacaaagcgtatggcgcaagcgatcacagtttcgtcccgctaacgccatttatcatcaag
cccaacaataagttacgcgctgaaaccagcgacagtttcgagttgggcagcaaatacgac
aatggtcagactcagctctatgtagccgtgttttattccatcttcgataactttatcgat
atcaaacaaattgattatgacgatacgacaggatcagttatccagcagtaccaaaatatc
gctggcgtcaaaacctacggggctgaaatgtcgttagtgcatcgtctagatgatcgttgg
agtgtcgaaaataaactcggatacgtcgatggtaaagatggtgaaaaccaatacgtgcgc
accttaaccccactagaagggagtgtgcagctcaactaccaacgagatcgatgggacgct
tacagccgactgaactgggcgagtgccatgagccgagtgccgacttgcaccacagagcaa
ggcaaagaaactgaatgtgccacgaccacaggttgggtgagttgggacatcggcctcaac
taccaatggaacgcacaactgagtgccagtttcaacgtggttaacctgctcgatcgagaa
tacacgcgctatcaagatgtcgctggtgtgacgccaagtgacacgcgttattccactgag
ccgggacgctatttcaccgtgcacgctaagtatgtgttctag
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