Vibrio tarriae: CEQ48_03460
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Entry
CEQ48_03460 CDS
T08683
Name
(GenBank) helix-turn-helix transcriptional regulator
KO
K20918
LuxR family transcriptional regulator, positive regulator of biofilm formation
Organism
vti
Vibrio tarriae
Pathway
vti05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vti00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
CEQ48_03460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vti03000
]
CEQ48_03460
Transcription factors [BR:
vti03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
CEQ48_03460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VpsT-like_REC
GerE
Sigma70_r4_2
Sigma70_r4
HTH_23
TubC_N
HTH_24
GNVR
HTH_40
HTH_10
Motif
Other DBs
NCBI-ProteinID:
ASK53867
UniProt:
A0AAU8WAP8
LinkDB
All DBs
Position
2:655904..656578
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AA seq
224 aa
AA seq
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MKDENKLNVRMLSDVCMQSRLLKEALESKLPLALEMTPFSELWLEESKPESRNIQMLVID
YSRISDDVLTDYSSFKHISCPDAKEVIINCPQDIEHKLLFKWNNLAGVFYIDDDMDTLIK
GMSKILQGEMWLTRKLAQEYILHYRAGNSVVTSQMYAKLTKREQQIIKLLGSGASNIEIA
DKLFVSENTVKTHLHNVFKKINAKNRLQALIWAKNNIGIEEVNS
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
atgaaagatgaaaacaaactaaacgttagaatgctttctgatgtttgtatgcaatccaga
ttgttgaaagaggcgttagaatcaaaacttcctttagcgctggaaatgacaccattttct
gagctctggctcgaggagagtaaaccagaaagccgcaatattcagatgctggtgattgat
tattctagaatttctgatgatgtattgaccgattatagctcgtttaagcacatcagttgt
cctgatgctaaagaagtaatcattaactgcccacaggatattgagcataaattactcttt
aaatggaataatttggccggagtattctatatcgatgatgatatggacacgctgatcaaa
ggcatgagtaaaattttgcagggtgaaatgtggctaactcgtaagctggctcaagaatat
attcttcactatcgtgctggcaactcagttgttacctcgcaaatgtacgcaaaattaacc
aaaagagaacaacaaattatcaagttgcttggaagtggtgcttctaatattgaaattgca
gataaactctttgtgagtgaaaatacagtaaaaacacatctgcataatgtctttaaaaaa
attaatgccaaaaatcgcttgcaggcactgatttgggcgaaaaacaatattggaatcgaa
gaagtcaattcttaa
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