Vibrio tarriae: CEQ48_04440
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Entry
CEQ48_04440 CDS
T08683
Symbol
rnb
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
vti
Vibrio tarriae
Brite
KEGG Orthology (KO) [BR:
vti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vti03016
]
CEQ48_04440 (rnb)
Enzymes [BR:
vti01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CEQ48_04440 (rnb)
Transfer RNA biogenesis [BR:
vti03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CEQ48_04440 (rnb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
ASK54036
UniProt:
A0AAU8WQA2
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All DBs
Position
2:complement(870251..872287)
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AA seq
678 aa
AA seq
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MFQDNPLLAQLKQKIQETLPKKEGTIKASDKGFGFLEVDSKTSYFVPPPYMKKCLHGDKV
VAFIRTENEREVAEPSELIEQSLTRFIGRVKLFKGKLNVAPDHPQLKKLSLKAKTKKGLN
EADFQEGDWVVAHLVRHPLKGDDGFFVQISHKITDANDKIAPWWVTLAENDLPNSEPAGI
DDWQLKDDADLVREDLTALPFVTIDGESTKDMDDALYAQQLPNGDFALTIAIADPTAYIT
PEDEMDKVARERGFTIYLPGRNIPMLPRDLADELCSLMEDQVRPALCCSVTISKDGVIGD
DIRFFAANIKSHARLVYDHVSDWLETGSSEQWQPSEEIAQVVRDLYAFSQARATWRETHA
VVFPDRPDYRFELSAENDVVAIHADMRRTANRLVEESMITANICAGKTLQTTFGFGVFNT
HAGFKAEKMADVVELMAVHSAPNADAETLATVEGFAALRRWLATQETSYLDNRIRKYQSY
SEIGNQPLPHFAMGLDVYATWTSPIRKYGDMINHRLLKAHILGKAPVQTPDETVGEELAL
HRKHHKIAERNVADWLYARTLADEPAKETRFQAEIFDINRPGMRVRLLENGAMAFIPGAL
ILDNKERIECNGEDGTVLIDKEVVYKLGDVLEIVLTEVNQENRSLVGKPTQVFADLVSET
QTSAEQPAEGAENSEPQA
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atgttccaagacaatccgctcctcgcgcagcttaaacaaaaaatccaagaaaccctgcct
aagaaagaaggcaccatcaaagccagtgacaaaggttttggcttcctcgaagtcgatagc
aaaaccagctactttgttccgcctccttatatgaagaagtgtttgcatggcgacaaagtc
gtggctttcatccgtaccgaaaatgaacgcgaagtggctgagccttctgaactcatcgag
caatcgctgactcgcttcattggccgcgtaaaactatttaaaggcaaactgaacgtcgcg
ccggatcatccacaactgaaaaagctgtcgctgaaggccaaaaccaagaaaggcctcaac
gaagctgacttccaagaaggtgattgggtcgtcgctcaccttgtccgccaccctttgaaa
ggtgacgatggtttctttgtgcagatttcacacaaaatcaccgatgcgaatgacaaaatt
gccccttggtgggtgacattagcggaaaacgatctgcctaacagcgagcctgcgggcatt
gacgattggcaactcaaagatgatgcagacttggttcgtgaagatctgaccgcactgcct
tttgtcaccatcgatggtgaatccaccaaagatatggatgacgcgttgtacgcacagcaa
ctgccaaacggtgattttgcgctgaccatcgcgattgccgatccaaccgcttacatcacc
ccagaagatgagatggacaaagtggctcgtgagcgtggctttaccatttatttgccaggt
cgcaacattcctatgttgccacgcgatctcgccgatgagctttgctctctgatggaagac
caagttcgtccagccctatgctgctcagtcacgatcagtaaagatggcgtgattggcgat
gatattcgctttttcgcagccaacatcaaatctcacgcacgcctagtgtacgaccatgtt
tctgactggttggagactggcagctcggaacagtggcaaccaagcgaagaaattgcccaa
gtggtgcgcgacctttacgctttctcacaagcgcgtgcgacttggcgtgaaacccatgcc
gtggtatttccagatcgtccagactatcgcttcgaacttagcgccgaaaacgatgtcgtg
gcgattcatgctgacatgcgccgtacggcaaaccgcttggtcgaagaatcgatgatcact
gccaacatctgtgcgggtaaaacgctgcaaaccacatttggttttggtgtattcaatacc
cacgctggttttaaagcggagaaaatggccgacgtggtggagttaatggctgttcacagt
gcaccgaatgcggacgctgaaacgctggcaacggtggaaggctttgctgctctgcgccgc
tggctagccacacaagaaaccagctacctcgataatcgtattcgtaaataccaaagctac
agtgagattggcaaccagcctctcccccacttcgcgatgggccttgatgtgtacgcaacg
tggacttcgccgattcgtaaatacggcgacatgatcaaccatcgcctactgaaagcgcac
attctgggcaaagccccggtgcaaacgccggatgagacagttggtgaagaactggctctg
caccgtaaacaccacaaaattgctgaacgtaatgtggcagattggctgtatgcgcgcaca
ctggctgatgagccagcgaaagaaacccgcttccaagccgagatcttcgatatcaaccgt
ccgggcatgcgtgtgcgcttactcgaaaatggtgcaatggcctttattccgggagccctg
atcctcgataacaaagagcgtatcgagtgtaatggtgaagacggcacggtactgatcgat
aaagaagtggtgtacaaacttggtgatgtgctggaaatcgtcctgacagaagtcaatcaa
gaaaaccgaagcttagtgggtaaaccaacgcaagtgtttgctgatctggtttcagagacg
caaaccagcgcagagcaacctgctgagggcgcagaaaatagcgagccacaagcttag
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