Vibrio tarriae: CEQ48_05235
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Entry
CEQ48_05235 CDS
T08683
Name
(GenBank) exonuclease sbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
vti
Vibrio tarriae
Brite
KEGG Orthology (KO) [BR:
vti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vti03400
]
CEQ48_05235
DNA repair and recombination proteins [BR:
vti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CEQ48_05235
Archaeal homologous recombinant proteins
CEQ48_05235
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GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
ASK54179
UniProt:
A0AAU8WBI4
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Position
2:1052651..1053790
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AA seq
379 aa
AA seq
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MKFLHTSDWHLGRQFHQVSLLDDQSAVLAQLIDFLRDNPVDAVIVAGDIYDRSIPPTAAI
DLLDEVVSVICGELKTPLLMIPGNHDGAKRLGFAAKQMKNSGLHIFADFEQMMQPLVLHS
PQAGEVAFWGMPYHDPELVRHYYHNDITTHDAAHQFLCESILAQRNPSQRHVLISHCFVD
GAMESESERPLSIGGSDRVDHRHFLPFDYVALGHLHQPQMKGAEHIRYSGSLMKYSFGEQ
HQSKGATLVELGPQGFISATHIPLTAPHQMRIIEGELEAILAAGATDPQADDYLLVRLLD
KHAILDPMEKLRQVYPNVLHLEKPGMLIGVDQEMGKARLARGELDMFRDFFLEAKREPLS
EQQEKVVIEVIARLKAEGM
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttctacatacttcggattggcatcttggtcgccaatttcatcaagtctcatta
ttagatgatcaaagcgccgttctcgcacaactgatcgactttctgcgcgacaatccggtg
gatgccgtgattgtcgccggtgatatttatgatcggtcgattccacccacggcggcgatt
gatttattggatgaagtggtcagcgtgatctgtggcgagttgaagacacctttattgatg
atcccgggcaatcacgatggtgcgaagcgtttaggctttgccgcgaagcagatgaaaaat
tcgggcttacatatctttgctgattttgaacagatgatgcagccacttgtgctgcattca
ccgcaagcgggcgaggtcgctttctggggaatgccgtatcacgacccagagttagtgcgc
cactactatcacaacgacatcaccacgcatgacgctgcacaccaatttttgtgcgagagt
attcttgctcagcgcaatccatcacaacgtcacgtattaatcagccactgttttgtcgat
ggcgcgatggagtcggaatctgagcggccgttatcgattggtggatcagatcgtgttgac
catcgccattttttgccttttgactacgtcgcactcgggcatttacaccagccgcagatg
aaaggggcggaacacattcgttactctggctcattgatgaaatacagcttcggtgagcag
caccaaagcaaaggcgctaccttggtagagctggggccgcaaggttttatcagcgcaacg
catattcctctcaccgcgcctcatcaaatgcgcattattgagggagagttggaggcgatt
cttgcggcgggagccaccgatccgcaggcagacgattacctgctagtacgtcttttggat
aagcatgccattctcgacccgatggaaaagctgcgtcaggtttatccgaatgtgctgcat
cttgaaaagccgggcatgttgattggtgtggaccaagagatgggcaaggcacgattggca
cgaggggaattggatatgtttcgtgattttttccttgaggcgaaacgtgaacctctgagt
gaacagcaagagaaagtggtgattgaggtgattgcgcgcctgaaagcggagggcatgtaa
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