Vibrio tarriae: CEQ48_05240
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Entry
CEQ48_05240 CDS
T08683
Name
(GenBank) nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vti
Vibrio tarriae
Brite
KEGG Orthology (KO) [BR:
vti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vti03400
]
CEQ48_05240
DNA repair and recombination proteins [BR:
vti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CEQ48_05240
Archaeal homologous recombinant proteins
CEQ48_05240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
Motif
Other DBs
NCBI-ProteinID:
ASK54180
LinkDB
All DBs
Position
2:1053792..1056833
Genome browser
AA seq
1013 aa
AA seq
DB search
MRPLKLILQAFGPFAGREEIDFTKLGDAPLFLINGATGAGKSSILDAICYALYGETTGSE
RTGDQMRCDYADPECLTEVSFEFELAGARYQITRQPDQEIPKKRGDGMTKKSHSATLVAL
KADGNELIANKPNPVAKAVVELMGLDVKQFRQVMVLPQGKFRELLTANSKEREQIFGQLF
QTQLYSQIERALFERAAGIRKEKEEFDQQIKGTLSVVGLESEEQLQTELTELAPVLTHAQ
SQLKVEQQQWDETKAHYQAALELEQQFIRKQQLVVEIATHQEQATHIETLRQQRQQAQKA
ARLTAAHQQWHQAQKNLQQAKLKVEQQQTLLQQAKAQQQQAQQASQQASLACEEVPKLNE
QRITWQRAEQKLLAQENVQQAVAKAERELQLATQNALNLQQASEKLEQELQNQRLEWEQQ
QRQLTRLEVQKARMNQLVQQVQAREREQSLLNELQTAQQAVLRFEQQHRHIQTQAEQAKL
TADKREFAWHTQRAAELALALTQNEPCPVCGSLEHPNKAQYSGDVVTKVQVEQARQQQQD
WVQRQQEAFHVWQQQGFKTEQIAQNLTTLSSELALQQVALLNELIEQQQILHSDIAALQQ
LNPDLLKRQIEEGEQRLAHTKMTLEKQNQNQQQAWQTLAQLQAELASLRQEIPPELPDLD
TLRSAIGRVQNQIEILQKAEHTAREQWVQAQKQFASVQAAHQAAIEAHRESQSQQEETTS
AWQQGLLHSGFSDESTYLAARLTDEAIVNIERQIAQYEERSAMLSGEQQALSRKLAEKSR
PELAPLIVKVTQAEESMALALQVFTQHQSRMDGLQRVAKQLADLYQKNRALEAEYQVVGT
LSDIANGKTGAKVSLHRFVLGVLLDDVLLQASQRLMKMSRGRYLLKRKEERAKGNVGSGL
DLMVEDSYSGKWRDVATLSGGESFMAALSLALGLSDVVQSYSGGIRLDTLFIDEGFGSLD
PESLDLAIQTLIDLQQGGRTIGIISHVTELKEQIGLRLDVLATRMGSTLRLIT
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccgttaaaacttattctacaagctttcggcccttttgcgggacgagaagagatt
gactttacgaagttgggtgatgctccactgtttttgatcaatggggcaaccggtgcaggt
aaaagctcgattctggatgcgatttgctacgccttgtatggcgaaaccacgggcagtgag
cgtaccggcgaccaaatgcgctgcgattacgcggatcctgagtgtctcaccgaagtcagt
tttgagtttgagctggcgggggcgcgttaccaaatcacccgtcagcccgatcaagagatc
ccgaaaaaacggggggacgggatgacgaagaaatcccattccgccactttggttgcactg
aaagcggatggaaacgagctgattgccaacaagcccaatcctgtcgcgaaggcggtggtc
gaattgatgggacttgatgttaagcaatttcgccaagtcatggtgttgcctcaaggcaag
tttcgtgagcttttaaccgccaattcaaaagagcgtgagcagatttttggtcagcttttt
caaacccagctctacagccaaattgaacgggcgctgtttgagcgagcagcgggcattcgt
aaagagaaagaagagtttgatcagcagatcaaaggtacgttaagtgtcgtcggactggaa
agtgaagagcagttacaaaccgagttgaccgaactggccccagtattaacccatgcgcaa
tcacaactcaaagttgagcaacagcagtgggatgaaacaaaagcgcactatcaagctgcg
cttgagttagaacagcaatttatccgcaagcagcaattggtggtagaaatcgctactcac
caagagcaggccacgcacatcgaaacactgcgtcagcaacgccagcaagcccaaaaagca
gcgcgtttaaccgccgcccatcaacagtggcaccaagctcaaaaaaacctacagcaagct
aagcttaaggttgagcagcagcagactctgttgcaacaggcgaaagctcagcagcaacag
gctcaacaggccagtcagcaagccagtttagcctgtgaagaagtacccaaattaaacgag
caacgcatcacgtggcagcgtgctgagcaaaaattgttggcacaagaaaatgttcagcaa
gcggtggccaaggctgagcgtgaactgcaactggcgacacaaaatgcgcttaatttgcag
caagcgagcgaaaagctagagcaagagctacaaaaccaacgcctcgaatgggaacagcaa
cagcgccaattaacgcgcttagaagttcaaaaagcgcgaatgaatcagttggtgcagcaa
gttcaggctcgcgagcgagaacaatcgctactcaatgaattacaaaccgctcaacaagct
gtgttgcgctttgaacagcaacatcgccacatccaaactcaggccgaacaagcgaaactg
accgcggataaacgggagttcgcctggcatacccagagggctgcggagcttgctctcgca
ctcacacaaaatgaaccttgtccggtgtgcggcagtttagagcatcccaataaagcgcaa
tattcgggtgacgttgtcaccaaggttcaagttgaacaagccagacagcagcaacaagat
tgggtgcagcgtcagcaagaggcattccatgtttggcaacaacaagggtttaaaaccgag
cagatagcgcaaaatctcacgactttatcgagtgagctagctttgcagcaagtggcgtta
ttgaacgagctaattgaacagcaacagatacttcacagtgacattgctgcgctacaacag
cttaaccctgatttgctgaaacggcagattgaagagggggagcagcggttagcgcacacc
aaaatgacactcgaaaaacagaatcaaaaccagcaacaagcttggcagactttggctcag
ttacaggcggaattggcgagtttgcgccaagaaatcccgccggagcttcccgatcttgat
actttacgaagcgcgattgggcgtgtgcagaaccaaatagaaatcttacaaaaagcggag
catacggctcgtgaacagtgggtgcaggcgcaaaagcagtttgccagtgtgcaggcggct
catcaggcggcgattgaagcgcaccgtgagtctcagagtcaacaggaggaaaccacaagc
gcatggcagcaagggttactccattctggatttagcgatgagtcaacctatcttgccgct
cgtttaaccgatgaggctatcgtcaatattgagcgccaaatcgcccagtatgaagagcgc
agtgcgatgctcagtggtgagcagcaagccttatcacgtaaattagcagagaaaagtcgc
ccagagctggccccacttattgtcaaagtaactcaagctgaagaatcaatggcactggcg
ttgcaggtgtttacgcaacatcaatcgcgtatggacggtttgcaacgtgtcgccaagcaa
ctggctgatctgtatcagaaaaatcgtgcactagaagccgaatatcaggttgtgggtacc
ttaagtgatattgcgaatggcaaaacgggcgctaaagtcagcttacaccgctttgtgctt
ggcgttttgctggatgatgtcttgctacaagcttcgcaacgactgatgaaaatgagccga
ggccgctatttactcaaacgtaaagaggaacgcgctaaaggtaatgtaggctcagggctg
gatttgatggtcgaagatagctacagcggtaaatggcgcgatgtggcaaccttgtccggt
ggtgagtcgttcatggccgccttatcgcttgcgcttggtttgtccgatgtggtgcagtct
tacagcggcggtatccgtcttgatactctgtttattgatgaaggttttggtagtttggat
ccggaatctttagatttagcgatccaaaccctgatcgatcttcagcaaggtggccggacg
ataggaatcatctctcatgttaccgagcttaaagagcagatcggtctaagattggatgtg
ttggcgacaagaatgggtagcacgctgcgtttaatcacataa
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