Vibrio tarriae: CEQ48_06780
Help
Entry
CEQ48_06780 CDS
T08683
Symbol
rumA
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
vti
Vibrio tarriae
Brite
KEGG Orthology (KO) [BR:
vti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vti03009
]
CEQ48_06780 (rumA)
Enzymes [BR:
vti01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
CEQ48_06780 (rumA)
Ribosome biogenesis [BR:
vti03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
CEQ48_06780 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
TRAM
Methyltransf_25
PCMT
TRM5-TYW2_MTfase
RrnaAD
Methyltransf_15
Cons_hypoth95
MTS
Methyltransf_11
PrmA
Methyltransf_4
Methyltransf_23
Ubie_methyltran
FtsJ
DOT1
TPMT
Methyltransf_12
Methyltr_RsmB-F
Ribosomal_L22
Motif
Other DBs
NCBI-ProteinID:
ASK54519
UniProt:
A0AAU8WDL8
LinkDB
All DBs
Position
1:256092..257414
Genome browser
AA seq
440 aa
AA seq
DB search
MARFFQPKKHSTLDTKHQPVTIERLDHQGSGLAFLHKKPLFVDGALPGEEVLIQLTENKS
KYARGQLIKVLKPSADRVAPFCAHYAQCGGCDLQHLDRAGQIHHKQQALSQLMVKFAGQS
LALSAPVCSDDQGYRRRARLSLMWDKKTQQLQLGFRRKQSKAIVNVTHCPVLEPCLNALL
PDLNALLSEWSQPERLGHVELVKGDNTRVLVLRHLGALTEQDQQRLTDFASQNQLTLYLM
LEAGELQHVQGEAPYCEETGSRLSFLPSHFIQVNRAVNQHMVAQALNWLEVSPQERVLDL
FCGLGNFTLPLAKQAQEVVGVEGVDEMVQHATHNAKLNQINNVAFYQANLEQDMTSASWA
QQKFAKVLLDPARAGAEGIVDQLSALGAKRVVYVSCNPATLARDSQSLLSQGFRLEKLGM
LDMFPHTSHLESMALFVKKG
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtttctttcaaccgaaaaagcacagcacgttagacacaaagcatcagccggtc
actattgaacggttggatcaccaaggcagcggactggcctttttacacaagaaacccttg
tttgttgacggcgctttgccgggggaagaggtgctgattcagctcactgaaaacaagagc
aaatacgcgcgcggtcaactgattaaagtgttgaaacccagcgctgaccgtgttgcacct
ttctgtgcgcattatgcgcaatgtggtggttgcgatttacagcatcttgaccgagcggga
caaatccatcacaagcagcaagccttaagtcaattaatggtgaagtttgcagggcagagt
cttgctctgtctgcgccagtttgttctgatgatcaaggctaccgtcgtcgcgcacgctta
agcctgatgtgggataagaaaactcagcaactacaattgggtttccgccgcaagcagagc
aaagcgattgttaatgtgacccattgccccgtgctggagccgtgtttaaacgcgctgttg
cctgacttgaacgctttgttgagtgagtggagtcaacctgagcggttggggcatgtcgaa
ttggtgaaaggggataatactcgcgtgttggtgctgcgccatttaggcgcgctgactgaa
caagatcagcagcgtttaactgactttgcttcgcaaaaccaactaaccttatatctgatg
ctggaagcaggcgaattgcaacatgtgcaaggtgaagcgccatactgtgaagaaacaggc
agccgcttaagtttcttgcccagccattttattcaggtcaatcgcgcggtgaatcagcac
atggtcgcgcaggccttgaattggcttgaggttagcccacaagaacgcgtgctcgatctc
ttctgtggcttagggaatttcacgctgccgctggccaaacaagcgcaagaggtggtgggc
gttgaaggtgttgatgagatggtgcaacacgccactcataacgcgaaattgaaccaaatc
aataatgtggcgttttatcaggccaatttggaacaagatatgacgagcgcctcatgggcg
cagcagaaatttgctaaagtactgctcgacccagcccgcgcaggcgcagaagggattgtg
gatcaactctctgcgttaggtgccaagcgggttgtgtacgtgtcgtgtaatcctgcgaca
ttagcacgagacagtcaaagcttgctgagccaaggatttcgcttagagaagctgggcatg
ttggatatgtttccgcacaccagtcatctcgagtccatggctttgtttgtgaaaaagggc
tag
DBGET
integrated database retrieval system
