Vibrio tarriae: CEQ48_07740
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Entry
CEQ48_07740 CDS
T08683
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
vti
Vibrio tarriae
Pathway
vti03030
DNA replication
vti03430
Mismatch repair
vti03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CEQ48_07740
03430 Mismatch repair
CEQ48_07740
03440 Homologous recombination
CEQ48_07740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vti03032
]
CEQ48_07740
03400 DNA repair and recombination proteins [BR:
vti03400
]
CEQ48_07740
Enzymes [BR:
vti01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CEQ48_07740
DNA replication proteins [BR:
vti03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CEQ48_07740
DNA repair and recombination proteins [BR:
vti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CEQ48_07740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ASK54703
UniProt:
A0AAU8WD28
LinkDB
All DBs
Position
1:485114..488593
Genome browser
AA seq
1159 aa
AA seq
DB search
MSDPKFIHLRIHSDFSMVDGLSKVPPLVKKVAAMGMPAMALTDFTNLCGLVKFYSTAHNC
GVKPIIGADFTLQSEEFGDELTKLTLLAKNNVGYKNLTLLISKAYLRGHVQHQPVIDKAW
LVEHAEGLIVLSGGKRGEVGRALLKGNQQQVERCIEFYQTHFADHFYLELIRTGRADEES
YLHFALDVAEQYDLPVVATNEVVFITEESFEAHEIRVAIHDGYTLEDPRRPKNYSPKQYL
RSEAEMCELFADIPEALANSVEIAKRCNVTVRLGEYFLPNFPTGGMAIEDFLVMKSREGL
EERLEFLFPDPQVRAQRRPEYDERLQIELDVINQMGFPGYFLIVMEFIQWSKDNDIPVGP
GRGSGAGSLVAYALKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDKRDQVIDHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPFGFVDRISKLVPPDPGMTLEKAFIAEPA
LQELYDADEEVKELIDKCRILEGCTRNAGKHAGGVVISPTAITDFAPIYCDAEGNFPVTQ
FDKNDVETAGLVKFDFLGLRTLTIIDWALGLVNPRLKKAGKPPVRIEAIPLDDARSFRNL
QDAKTTAVFQLESRGMKELIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDEKWQHESLKEILEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRAVFQEGAEKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPA
EFMAAVMTADMDNTEKVVGLVDECKNMGLTVLPPDINSGLYRFNVDDNGAIVYGIGAIKG
VGEGPIEAILEARNKDGYFKDLFDFCARIDLKKVNKRVIEKLILAGALDRLGPHRAAMMA
SVDDAVRAASQHHQAEAFGQADMFGVLTDAPEEVEQKYTQVPEWPEKVRLEGERETLGLY
LTGHPVDEYLKELTKYTSCRLNEAAPTRRDQSLTVAGLVIAARVMTTKRGTRIGLMTLDD
RSGRMEVMLYSEALDRYAEWLEKDKILVVSGQVSFDDFNGGLKMSAREVMDLGSAREKFA
RGLSISILQSQIDQQFFERFSHILEPHRAGTVPVNVYYQRPDARARLTLGTEWRVTPSDT
LLDELKQLLGNDQVELEFN
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacccaaagttcatccacttacgtatacacagtgatttctctatggtggatggt
ttgtccaaagtcccgccattggtgaaaaaagtggcggcaatgggcatgcccgcaatggcc
ttgaccgatttcaccaacctgtgtggcttggtgaagttttacagcaccgcgcataactgc
ggggttaagccgatcattggtgccgactttactttgcaatcggaagagttcggtgatgag
ctgaccaagctcaccttgcttgctaaaaataatgtcggttacaaaaacctcaccctattg
atttctaaagcgtatttgcgcggccatgtccagcatcaacctgtgattgataaagcgtgg
ttggtcgagcatgccgaagggctgattgtgctctcgggtggaaaacggggtgaagtgggg
cgcgcattactcaaaggcaatcagcaacaagtagaaagatgcattgagttttaccaaact
cactttgccgatcatttctatctagagcttattcgcactggtcgtgccgatgaagagagc
tatttacactttgcgctggatgtggcagagcagtacgatttgcccgtcgtggcaaccaac
gaagtggtgtttatcactgaagagtcgtttgaagcccatgaaatccgagtcgcgattcac
gatggatatacgctggaagatccacgtcgcccgaaaaattacagcccgaagcagtatctg
cgcagcgaagcggagatgtgtgagctgtttgcggacattccagaagcgttagccaacagt
gtcgagattgccaaacgttgtaacgtgaccgtacgtttgggcgaatatttcctgcctaac
ttcccaactggcgggatggcgattgaagatttccttgtgatgaaatctcgcgaagggttg
gaagagcgactcgaatttcttttccctgatccgcaagtccgtgcacagcgccgtccagaa
tatgatgagcgactgcaaatcgagctcgatgtcatcaaccaaatgggctttcccggttac
ttcttgatcgtgatggagtttatccagtggtcaaaagataacgatattccagtagggccg
ggacggggctcgggtgcgggttcgttagtcgcgtacgcactgaaaatcaccgaccttgat
ccgctggaatacgatctgctgttcgagcgtttcttgaacccagagcgggtctccatgccc
gacttcgacgtcgatttctgtatggataagcgtgaccaagtgattgatcacgtagcggaa
atgtatggtcgtgatgcggtatcacaaatcatcactttcggtaccatggcggcgaaagcg
gtgattcgcgatgtggggcgtgtgcttggtcatccgttcggttttgtcgatcgcatttca
aaattagtaccacccgatccgggcatgacgctcgagaaagcctttatcgccgagcctgca
ctgcaagagctgtatgacgcggatgaggaagtcaaagagctgatcgacaagtgtcgaatt
ctggaaggttgtacccgtaacgctggtaaacacgctgggggcgtggtgatctcgcccact
gccattactgactttgcgccgatttactgtgatgcggaaggcaacttcccggttactcag
ttcgataagaacgatgtggaaaccgccggcttggtcaagtttgacttcttggggctgcgc
actctcaccatcattgattgggcgttggggctggttaacccgcgtttgaaaaaagcaggc
aaaccacccgtgcggattgaagcgatcccgctcgatgatgcgcgctctttccgtaaccta
caagatgccaaaaccaccgcggtattccagcttgaatcgcgtggtatgaaagagctgatt
aagcggctacagcctgactgttttgaagacattatcgctttggtggcgctgtttcgtccg
gggccgttgcaatctggcatggtggataactttatcgaccgtaaacatggtcgtgaagcc
atctcttatccggatgaaaagtggcaacatgaatcgctcaaagagatcctagagccgacc
tacggcatcatcctctatcaggagcaggtgatgcagatcgcgcaggtgctttctggttac
accttgggtggggcagacatgctgcgccgtgcaatgggtaagaaaaagccagaagagatg
gctaagcagcgcgctgtgttccaagaaggggcggagaaaaatggcgttgatggtgagttg
gcgatgaaaatcttcgatctggtggaaaaattcgccggatacggatttaacaaatcgcac
tctgccgcctatgcgctggtttcctaccaaaccttatggttgaaaacccactatccagcc
gagttcatggcggcggtaatgaccgcggatatggacaacacggaaaaagtggttggcttg
gtggatgagtgtaaaaacatgggattgaccgtgttgccaccggacatcaactcaggcttg
tatcgctttaacgtggatgataacggtgcgattgtttatggtatcggcgcgatcaaaggg
gtgggtgaaggcccgattgaagccattcttgaagcgcgtaacaaagacggttacttcaaa
gatttgtttgatttctgcgcgcggattgatctgaaaaaggtcaacaaacgggtaattgaa
aaactgattctggccggtgcgctagacagattagggccacatcgcgctgccatgatggcc
tcggtcgatgatgcagtgcgcgcggcaagccaacatcatcaggctgaagcatttggccaa
gcggatatgttcggtgtgctcacggatgcgccagaagaagtcgagcagaaatacacgcaa
gtacctgagtggccggaaaaagtacgtttggagggggagcgcgagacgcttgggctctat
ctcaccggccatccagtcgatgaatacctgaaagagctgaccaaatacaccagttgccgc
ttgaatgaagccgcgccaacacggcgtgatcaatcgttaactgttgccggattagtgatt
gccgcgcgggtgatgaccaccaaacgtggtacgcgaattggcttaatgacgctggatgac
cgttcgggtcgtatggaagtaatgctctactcagaagcattagatcggtatgcagaatgg
ttagaaaaagataaaattctggtggtttccggacaggtcagctttgatgacttcaatggt
ggacttaaaatgtcggcgcgcgaggtcatggacttgggcagcgcgcgtgaaaaatttgcc
cgcggtttatccatctcgattttacagtcgcagattgatcaacaattttttgagcgtttt
agtcacatactagaacctcaccgcgcaggaaccgtacctgtcaatgtatactaccagcgc
cctgatgcgcgagcgcgcctgacgttaggcacagagtggcgagtcacgccaagcgataca
ttgttagacgaattaaagcagctacttggtaatgatcaggtagaactcgaatttaactaa
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