Vibrio tarriae: CEQ48_08625
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Entry
CEQ48_08625 CDS
T08683
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
vti
Vibrio tarriae
Pathway
vti02020
Two-component system
vti02040
Flagellar assembly
vti05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vti00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CEQ48_08625
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
CEQ48_08625
09142 Cell motility
02040 Flagellar assembly
CEQ48_08625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vti03021
]
CEQ48_08625
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
vti02035
]
CEQ48_08625
Transcription machinery [BR:
vti03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CEQ48_08625
Bacterial motility proteins [BR:
vti02035
]
Flagellar system
Flagellar assembly proteins
Stator
CEQ48_08625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
UPF0122
HTH_10
GerE
UPF0175
MarR_2
Rv2175c_wHTH
HTH_24
MarR
Phage_terminase
Motif
Other DBs
NCBI-ProteinID:
ASK54854
UniProt:
A0AAU8WDS3
LinkDB
All DBs
Position
1:654680..655414
Genome browser
AA seq
244 aa
AA seq
DB search
MNKALTYDQYGNLNSQQLFLKKYSVLVKRIAHHLIGRLPPSVLIEDLIQAGMVGLLEAQK
NYDGSKGASFETYAGIRIRGAMLDDIRRGDWVPRSVHKHNREISQAIAVLEGELNRDPTD
AEVAKFLNMSLEQYHTVLMDINCSRIVGIEDLGVSDDAISPFEEGEDNSPFHGVAEESFR
KALVESIKSLPEREALVLSLYYDEELNLKEIGEVLGVSESRVSQILSQSMQRLRTKLSSW
TRND
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagcgcttacatacgatcaatacggaaatcttaatagccagcagctatttctt
aagaagtactctgtattggttaagcgtatcgctcatcatttgattggccgtctcccgccc
agtgttctgattgaagaccttattcaagctggcatggttggtttgcttgaggcacaaaaa
aattatgatggaagtaaaggcgcgagctttgaaacctatgccggaattcggattcgtggg
gctatgctcgatgatatccgacgtggtgactgggttccgcgatctgtgcacaaacataat
cgggaaatcagtcaagcgattgcagtgctcgaaggagaactcaatcgcgatccaacggat
gctgaagtggcaaagtttttaaacatgtcactagaacagtatcacacagtgctgatggac
attaactgttcacgcattgttgggatagaggatctcggtgtttctgatgacgcgatttcc
ccgtttgaagagggggaagataactcgccttttcacggtgtcgctgaagaatctttccgt
aaagcactcgttgaatcaataaaatcgctcccggagcgtgaagctttggtactttcgctc
tattatgatgaagagctaaacttaaaagaaattggtgaggtacttggagttagtgaatct
cgcgttagccaaatactcagccaatctatgcagcgactaagaacaaagttaagttcttgg
actcggaatgactaa
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