Vibrio tarriae: CEQ48_09420
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Entry
CEQ48_09420 CDS
T08683
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
vti
Vibrio tarriae
Brite
KEGG Orthology (KO) [BR:
vti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vti03032
]
CEQ48_09420 (ihfB)
03036 Chromosome and associated proteins [BR:
vti03036
]
CEQ48_09420 (ihfB)
03400 DNA repair and recombination proteins [BR:
vti03400
]
CEQ48_09420 (ihfB)
DNA replication proteins [BR:
vti03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CEQ48_09420 (ihfB)
Chromosome and associated proteins [BR:
vti03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
CEQ48_09420 (ihfB)
DNA repair and recombination proteins [BR:
vti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
CEQ48_09420 (ihfB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
DUF4777
HU-CCDC81_euk_2
Glycos_trans_3N
Ybfg_C
Motif
Other DBs
NCBI-ProteinID:
ASK54999
UniProt:
A0AAU8WFK2
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All DBs
Position
1:819374..819652
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AA seq
92 aa
AA seq
DB search
MTKSELIERLCAEQTHLSAKEIEDAVKNILEHMASTLEAGERIEIRGFGSFSLHYREPRV
GRNPKTGDKVELEGKYVPHFKPGKELRERVNL
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atgactaagtccgaactgatagaaagactctgtgccgaacaaacgcacttgtctgcgaaa
gagatcgaagatgcggtaaaaaatatccttgagcatatggcctctacgttagaagcgggg
gagcgcatcgagattcgtggtttcggtagcttttccttacactatcgtgagccgcgtgtt
gggcgtaatcctaagactggcgataaggttgagttggaaggtaagtacgttccacatttc
aaaccaggcaaggaactacgcgaacgcgttaacttgtaa
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