Vibrio tarriae: CEQ48_10810
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Entry
CEQ48_10810 CDS
T08683
Name
(GenBank) diguanylate phosphodiesterase
KO
K13246
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vti
Vibrio tarriae
Pathway
vti05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vti00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
CEQ48_10810
Enzymes [BR:
vti01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
CEQ48_10810
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Gene cluster
GFIT
Motif
Pfam:
EAL
Response_reg
GerE
Sigma70_r4_2
Sigma70_r4
HTH_23
Sigma70_ECF
Terminase_5
DUF7698
Motif
Other DBs
NCBI-ProteinID:
ASK55256
UniProt:
A0AAU8WFW0
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All DBs
Position
1:1115469..1117223
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AA seq
584 aa
AA seq
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MKIMIVEDDRIQATSLKLKLRQLGLDDVILAENGFAALELCNKVSIDLMFCDIRMPQMDG
ISLLSQLSLQAPKIGVVILSAVEDTILELTHNMCSLAGFAYVDRLPKPYEVEDLQRVVEG
FQKQTEPETSHKPAITLTCDEIEQAFLHDHIFNYYQPQFDFRSGAMVGVEALVRYEHPTH
GMLSPAVFLPLIEQCGLHEKLFLTVLEKSVSALASIGADLQLSVNISQRNLQHSICDPIL
AICERYGFPASKLTLEMTEHEVYNGTPTSLANLARLRMYGVGLSIDDFGTGYASLGQLAQ
LPFTELKIDRSFVHDLASNYKHQQLTNMCLLLAQSLGLHCVVEGVENEETWQYLRQLGVD
TCQGYYAAKPMPIAQLSELYTKNRRQCLGCQSMDDGWQILLVDNHMLSATALQKVLNKEE
NVSKVFVAQDIEQMLHKLRDLPINQLVVESRFLSTISPAAFHELLEPYYRGAILVLHDGL
TAETQQDDSKAIVVKANTLMETSSRILQQAQQSTVRPQAQQEELAQLSERELTVAKMLVE
GLTNKEIALQLDINQKTVSTYKTRIMTKLGIKSAMELVRFVTLK
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataatgatagtagaagatgatcgaattcaggcgacgagcctgaagctcaagcta
agacagcttgggttggatgacgtcatcttggctgaaaacggatttgctgccttagaactg
tgtaacaaagtgagtatcgatttgatgttttgcgatattcgaatgccgcagatggatggg
atcagtttgttatcacaactgagtttacaggcacctaagataggtgtggtgatactcagc
gcggtggaagatacgattcttgagttaacccacaacatgtgtagtttggctggatttgct
tatgttgatcgcttacctaagccctacgaagtggaggatttacagcgtgttgtcgagggg
tttcaaaagcaaacggagcccgaaaccagtcacaaacctgcaatcacgctaacctgtgac
gagattgaacaagcttttttgcacgatcatatttttaattactatcaaccacagtttgat
tttcgcagtggggcgatggtgggcgttgaagcgctagtacgttacgagcacccaactcat
ggcatgttaagcccagcagtgtttctgcctttaattgagcagtgtggcttgcatgagaaa
ctcttccttactgtattagaaaagtcggtctctgcactggccagtattggtgctgacttg
cagctttccgtcaacatcagccagcgcaacttgcaacactcgatctgtgatcccattctc
gccatctgtgagcggtatggctttcccgcaagcaaactgactctagagatgacagaacat
gaggtgtacaacggaaccccgacctcattggccaaccttgctcgactgcgaatgtatggc
gttgggctatcgattgatgattttggtacgggctacgcgtcattaggtcaactggctcaa
ttgccttttacggaactcaagattgatcgcagctttgtgcatgacttggcaagcaactac
aaacaccaacaattgaccaatatgtgtttgttgctggctcaatctttggggttgcactgc
gtcgtcgaaggggtagagaacgaagaaacatggcaatacttacgtcaacttggggtagat
acttgccaaggttactacgccgctaagccaatgccgattgctcagttgagcgagctttac
actaaaaatcgtcgtcagtgtttaggttgtcaaagcatggatgatggctggcaaatcttg
ctggtggataaccatatgctcagcgccacggcattacaaaaagtgctcaataaagaagag
aacgtcagtaaggtgtttgtggcacaagatattgagcagatgctgcacaaactgcgcgat
ttaccgatcaaccagctggtcgtcgaaagtcggtttttatcgacaatcagtcctgcggca
tttcacgagttgcttgagccttactatcgaggagcgatcttggtgctgcatgatggatta
accgctgaaactcaacaggatgactccaaagccatcgtcgtcaaagcgaatactttgatg
gaaaccagttctcggatcttacagcaagcgcagcagagcactgtgcgcccacaggcgcaa
caagaagagcttgctcagctttctgagcgagagttgacggttgcgaaaatgttagtggaa
gggctgacaaataaggaaatcgccctacaactcgatatcaatcaaaaaaccgtaagcact
tacaagactaggattatgaccaagttagggattaaatcggccatggaattggtgcgtttt
gtaacattaaaatag
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