Vibrio tarriae: CEQ48_10890
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Entry
CEQ48_10890 CDS
T08683
Name
(GenBank) ATP-dependent helicase
KO
K19789
DNA repair protein RadD
Organism
vti
Vibrio tarriae
Brite
KEGG Orthology (KO) [BR:
vti00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vti03400
]
CEQ48_10890
DNA repair and recombination proteins [BR:
vti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
CEQ48_10890
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
SLFN-g3_helicase
DUF7577
DZR
AAA_22
AAA
P-loop_SecA
Zn_Ribbon_1
zf-tcix
Zn_ribbon_3
MgtE_N
AAA_16
ERCC3_RAD25_C
AAA_30
FAD_binding_4
T1R_D3-like
Motif
Other DBs
NCBI-ProteinID:
ASK55269
UniProt:
A0AAU8WGF3
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Position
1:complement(1132436..1134220)
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AA seq
594 aa
AA seq
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MYTLRPYQADSVKAVVHYFRQHSTPAVIVLPTGAGKSLVIAELARLARGRVLVLAHVKEL
VEQNHAKYEGYGLTGAIFSAGLGRKETDQQVVFASVQSVVRNLSEFQNQFSLLVIDECHR
VPDDKNSSYQKVITHLLELNPGMKVLGLTATPYRLGMGWIYQYHTRGLVRSEEPRFFRDC
IFELPVHYLLDEGFLTPAQLIDTPVMSYDFSQLKPANTGRYRESELDLVIEQSQRATPQI
VAQIIELAKARQGVMIFAATVRHAEEIYRLLPNEHAALVIGDTPTPERDRIIQAFKQQQI
KFLVNVSVLTTGFDAPHVDLIAILRPTESVSLYQQIVGRGLRLAAGKSDCLVLDYAGNQY
DLYQPEVGDPKPDSDSEIITIPCPACGFNNNFWGKLDANGFLIEHYGRRCQGYFTDDETG
EREHCGYRFRAKYCNECGADNDIAARICHECNATLVDPDKKLKEALNLKDALVFECSDMS
LKVHKDAKGKSQLQVTYHGQDAVQVHQFWSLGTPRQKQQFHDQFVRPHLADKHRPFEAAT
PAKVVDHQHRFRPPLFVIARKSGRFWTIRDKVFADEFVSPTEVHLSNRAYTLPT
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgtatacgttacgaccttatcaagccgactcagtgaaagccgtcgtgcactattttcgc
cagcactctacccccgctgtgattgtgcttccgaccggcgcaggaaaaagcttagtgatc
gcagagcttgcgcgccttgcccgtggccgcgtattggtgttggcccatgtcaaagagttg
gttgagcaaaaccacgccaaatatgaaggctatggcttaaccggcgcaattttttccgca
ggcttggggcgcaaagaaaccgatcaacaagtggtgtttgcctcagtgcaatcggtggtg
cgcaacttatctgagttccaaaaccagttctctttattggtaattgatgagtgccaccgc
gtccccgatgacaaaaacagcagttatcaaaaagtgatcacccatttgctggaactcaat
ccgggcatgaaagtgctcggactgaccgcaaccccctatcggctcgggatgggatggatt
taccagtatcacacccgtggtttagtgcgcagtgaagagccgcgttttttccgcgactgt
atttttgagctacccgttcactatttattggatgaaggttttctcacccccgctcaattg
attgatacccccgtcatgagctatgacttttcgcagttgaaaccggccaataccgggcgc
tatcgtgaatcagaactcgacttggtgattgagcaatcacagcgcgccactccgcaaatt
gttgcccagatcattgagcttgctaaagcgcgacaaggggtgatgatttttgcagcgacc
gtgcgtcacgccgaagagatctaccgtttactgcctaacgaacacgctgctttagtgatt
ggtgataccccgacgccagagcgtgatcgcatcatccaagcgttcaaacagcaacagatt
aagtttttggtcaatgtttccgtactcaccaccggatttgatgcgccacatgtcgatttg
attgcgattttaaggccaacagaatcggtcagtctctatcaacaaattgtcggccgcggg
ctacgccttgcggcgggcaaatccgactgtttggtgctcgactatgcgggtaatcagtac
gatctgtatcaacctgaagtgggcgatccgaaacccgattcagacagcgaaatcatcacc
attccctgccccgcttgcggttttaacaataacttttggggcaagctggatgcgaacggc
tttctgattgagcactatggccgccgctgccaaggctatttcaccgatgatgagacgggt
gagcgcgagcattgtggctaccgttttcgtgcgaaatactgcaatgaatgtggtgcggat
aacgacatcgccgcacgcatctgccatgagtgtaacgccacgttagtggaccccgataag
aaactcaaagaggcactcaatcttaaagatgcgctggtgtttgaatgttccgacatgagc
ctaaaagttcataaagatgccaaagggaaaagccagcttcaagtgacttaccacgggcaa
gatgcggtgcaagtacaccaattttggtcactaggcacgccacgccaaaagcagcaattt
cacgaccaatttgtacgtccacatctggctgacaaacatcggccttttgaggcagcaacg
cccgccaaagtcgtggatcatcagcaccgttttcggccccccctgtttgtgattgcgcga
aaatcgggccgcttttggaccattcgagacaaagtatttgccgatgagttcgtctcccca
accgaagttcacttatcaaaccgagcttatacccttcctacttga
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