Vibrio tarriae: CEQ48_12600
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Entry
CEQ48_12600 CDS
T08683
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
vti
Vibrio tarriae
Pathway
vti03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vti00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CEQ48_12600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vti03400
]
CEQ48_12600
Enzymes [BR:
vti01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
CEQ48_12600
DNA repair and recombination proteins [BR:
vti03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CEQ48_12600
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CEQ48_12600
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CEQ48_12600
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ExoI_SH3
ExoI_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ASK55583
UniProt:
A0AAU8WPS8
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All DBs
Position
1:1526954..1528378
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AA seq
474 aa
AA seq
DB search
MQQEHQPTFFFFDYETWGVNPAKDRPSQFAGVRTDMDFNIIGEPLVIYCQLPNDYLPAPE
AALITGITPQKANSQGLAEPEFIARIHAELSTPNTTSLGYNSIRFDDEVTRYTCYRNFID
PYAWSWQHGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHLSVANGIEHSNAHD
AMADVIATIELAKKVKAAQPKLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGMLGRERHY
TSWIVPIAWHPTNQNAVIVVDLGKDPQPLMDLDAETLQARLYTRHEDLAPDERPVPVKLV
HLNKCPILAPAKTLTAENAQKIGIDREQCLAHLNVIRQHPEIREKLVTVFSQEREFNQES
DVDSQLYAGFFSPADRAAMEIIRTTAPENLGSLAIRVADKRIEPLLFRYRARHYPHTLTD
AEQRRWAAHCRDYFERNLEGYMLNLENLVHEHQADPKKMAILKSVYHYVEKLAC
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaagaacaccagcccacattcttcttctttgattacgagacttggggagtcaat
cctgccaaagatcgtcctagtcagtttgcgggtgtgcgtaccgatatggacttcaacatc
atcggtgagcctttggtgatttactgtcagctgcccaacgactatttgcccgcccctgag
gccgcattgatcacagggatcacccctcaaaaagccaatagccaaggtctggcggagcca
gaatttatcgcgcgtattcatgctgagctctccacacccaataccaccagccttggctat
aacagcatacgttttgatgatgaagtgacgcgctacacctgctatcgcaactttatcgac
ccctatgcttggagctggcaacacggcaattcccgttgggatctgctggatgtgcttcgc
gcgtgtcatgctttgcgtcctgaaggtatcgagtggccggaaaatgatgatggctttacc
agctttaaactggaacatctttctgttgccaacggcattgagcacagcaacgcgcacgat
gcgatggccgatgtgattgccaccattgaactggcgaaaaaagtcaaagccgcgcagccg
aaattgttcgactacttcttcactatgcgccacaaacgcaagctgacagaactgattgat
attgtgaaccaaactccgctgatgcatgtttctggcatgcttgggcgtgagcgccactac
actagctggattgtgccgattgcttggcatccgaccaatcaaaatgcggtgattgtggtg
gatttgggtaaagaccctcagccgctaatggatctcgatgccgaaacgctgcaagcgcgt
ctctatacgcggcatgaagacctagcgccggatgagcgaccagtacccgtgaaattggtg
catctcaataaatgccccattctggctccggctaaaaccttgaccgcagaaaatgcacaa
aagattggtattgaccgcgaacagtgtctcgcgcacttgaatgtgattcgtcaacacccc
gagattcgtgaaaagctggtgactgtatttagccaagagcgcgaatttaaccaagagagt
gatgtggatagccaactctatgccggctttttctccccagccgatcgcgcggcaatggag
atcatccgcactactgcaccggagaatctgggcagcttagcgatccgggtggccgataag
cgcattgaaccactgctgtttcgttatcgtgcgcgccattatccccataccttaaccgat
gccgagcaacgccgctgggcagcgcattgccgtgactatttcgagcgcaatctagaaggt
tatatgttgaatttggaaaatctggtgcatgaacatcaagctgatccaaagaaaatggcg
attttaaaatccgtctaccattacgtggaaaaactcgcttgctaa
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