Vibrio tarriae: CEQ48_15590
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Entry
CEQ48_15590 CDS
T08683
Name
(GenBank) c-di-GMP phosphodiesterase
KO
K20965
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vti
Vibrio tarriae
Pathway
vti05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vti00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
CEQ48_15590
Enzymes [BR:
vti01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
CEQ48_15590
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GFIT
Motif
Pfam:
EAL
GGDEF
PAS_9
PAS_8
PAS_4
PAS
Motif
Other DBs
NCBI-ProteinID:
ASK56132
UniProt:
A0AAU8WIR2
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All DBs
Position
1:2159493..2161547
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AA seq
684 aa
AA seq
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MPAQTSSQLKHWFAKITSHSPFFFAILNDQHQYVMVNERYCDIAGLSSEEMVGMSDSQVL
GEHFYRHLKPFYERAFNNEHIESELTLSEIDLETSLHFSLSPIMINDRVQYLVFHAIDTS
EKQILVRSLEESESKYALLTTLLPDGLMMVENDCIISANPSAARLLGFDDAQKLLGENLS
RLFIDEKTKTVFSSQLASLLTEKPLVCLTGPRCGFERKIQLHAGCTSLLGNQSQLILLQD
ADEAPKQFSATTQADAHIDNLTGLYNRHGFTKRLEQCIQNETPLVMLYLDIDNFKNINDS
LGHHIGDKVIKEVAARLKRLLPQQAVLGHLGGDEFGLILPEPEHNRSAEMLADRIISLIN
QPFDLHHFSKRLACSIGSVRYPGDGNDARVLLQNADTAMYEAKERGRNRLIKFNDQMNKE
ARMRLWLEIELQKALQQNGLEVWYQPKVNARDFSINGAEALVRWKHPVEGYISPGAFIPV
AEKAGLIEHLGRVVMREVFATVKRWKLQGILPGRVAINISPEQFGNPQLIDYLEKLLRTT
GLDPNNITFELTESAVMSDSEHTQQMLNAIKKLGFTLSIDDFGTGYSSLAYLARFPIDEL
KIDRAFISNIDTLPKQLTVIENIINLGRSLNLTVVAEGVETQQQATLLSNLNCHSIQGFH
FYRPQPKHEVEELFAQNRRHRKSL
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctcaaacctcatctcagctcaagcattggtttgcaaaaattacgtcacacagt
ccgttcttttttgcaatcctcaatgatcaacaccaatacgtgatggtcaacgagcgctat
tgtgatatcgccggtctctctagcgaagagatggtcgggatgagcgatagtcaggttcta
ggcgaacatttttatcgccatctcaaaccgttttacgaacgtgcgtttaacaacgagcat
attgagtccgagctgacccttagcgaaatcgacctcgaaaccagcttacacttttctctc
tcccccatcatgattaacgatcgggtgcaataccttgtattccacgcgattgatacctca
gaaaagcagattttagtgcgctctctggaagaatcggaaagcaaatacgcactcctcacg
acactgctacctgatggtttaatgatggtagaaaatgactgcattatttctgccaaccct
tccgctgcacgtttacttggttttgacgacgcacaaaaactgctcggagaaaacctctcc
agactgtttattgatgaaaaaaccaaaaccgttttttcatcacagttggcttcgctgctg
acagaaaaacccttggtttgcttgactgggccaaggtgtgggtttgaacggaaaatccag
ctacacgcaggttgcacctctttactcggtaatcagtcgcagttgatcttattgcaagat
gccgatgaagcgccaaaacagttctctgcgaccactcaagccgatgcgcatatcgataac
ctcactgggctgtataaccgacacgggtttaccaagcgcttagagcagtgcatccaaaat
gagacgcctttggttatgctctatctggacattgataacttcaaaaacatcaatgactct
ctcggccatcacatcggtgacaaagtgattaaagaggtggctgcgcgtttaaaacgctta
ctgccacagcaagccgtacttggccatttgggcggtgatgagtttggtttgatcttgccg
gaaccagaacacaaccgctctgcagaaatgttggcagatcgcattatctctttgattaat
caaccttttgacctgcaccatttcagtaagcgtttagcttgttcgattggcagcgtgcgt
tatcccggagacggcaatgatgctcgcgtattgctgcaaaatgccgataccgcgatgtat
gaggctaaagagcgcggccgtaatcgcctgatcaaattcaatgatcagatgaacaaagaa
gcgcggatgcgcctttggttggaaattgaactgcaaaaagcgctacaacaaaacggtcta
gaagtgtggtaccaaccgaaagtcaatgcgcgtgattttagcatcaatggcgcagaagcc
ttggtacgctggaaacatcccgttgaaggctatatcagcccaggtgctttcattcccgtt
gcggaaaaagctggcttaatcgaacatttgggtcgcgtggttatgcgtgaagtcttcgcg
accgtcaaacgctggaagctgcaaggcattttgcccgggcgtgtggcgatcaacatctcc
cccgagcagtttggtaatcctcaactgattgattatttagaaaaactactgcgaacaact
gggctagatcccaacaacatcacatttgaactgaccgaaagtgcggtgatgagcgatagt
gaacatacccagcaaatgctcaatgccatcaaaaaactcggcttcaccttgtcgattgat
gacttcggtacaggttactcgtcgctggcttacttagctcgcttcccgatcgatgagctc
aaaatcgaccgcgcgtttatcagtaatatcgacactctacccaaacagctcacggtgatt
gaaaacatcattaatctggggcgctcactgaacctgaccgtggttgcagaaggggtagaa
actcagcaacaagccactttactctccaacctaaattgccactccatccaaggcttccat
ttttatcgcccacaacctaagcacgaagtggaagagttgtttgcgcaaaatcgccgccat
cgcaaatccctctaa
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