Vibrio tarriae: CEQ48_16195
Help
Entry
CEQ48_16195 CDS
T08683
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
vti
Vibrio tarriae
Pathway
vti05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vti00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
CEQ48_16195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vti03021
]
CEQ48_16195
Transcription machinery [BR:
vti03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CEQ48_16195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
AAA_18
Motif
Other DBs
NCBI-ProteinID:
ASK56237
UniProt:
A0AAU8WJ41
LinkDB
All DBs
Position
1:complement(2293147..2294157)
Genome browser
AA seq
336 aa
AA seq
DB search
MSVSNTVTKVEEFDFEDEALEVLETDAELANDEELVAVEGASEDVREEFDASAKSLDATQ
MYLSEIGFSPLLTAEEEVLYARRALRGDEAARKRMIESNLRLVVKISRRYSNRGLALLDL
IEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERALMNQTRTIRLPIHVVKELNIYL
RTARELSQRLDHEPTPEEIALELDRPVDDVTKMLRLNERISSVDTPIGGDGDKALLDILP
DSHNADPEFSTQDDDIRESLLNWLDELNPKQKEVLARRFGLLGYEPSTLEEVGREINLTR
ERVRQIQVEGLRRLREILVKQGLNMEALFNVEYDVN
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcagcaataccgtaaccaaagtagaagagttcgattttgaagatgaagcactg
gaagtgctagaaactgatgccgagctcgccaatgatgaagaattagttgctgttgaaggg
gcaagtgaagacgttcgtgaagagtttgatgcttctgcgaaaagtcttgatgcgacccag
atgtatctcagcgaaattggtttttcaccgctccttaccgccgaagaagaagtgctttat
gctcgtcgtgccttacgtggcgatgaagccgcacgtaaacgcatgattgaaagtaacttg
cgtttggtggtaaaaatttcacgccgttacagtaaccgaggattagcactgctcgatctg
attgaagaaggtaatcttggtctgatccgtgcggttgagaaattcgatccagaacgcggt
ttccgcttctctacctacgcaacatggtggatccgtcaaaccattgaacgtgcgctgatg
aaccaaacacgcaccattcgtctaccgattcatgtcgtcaaagagctgaacatttatttg
cgtactgctcgcgaattatcacagcgccttgaccacgaacctacgccagaagaaatagct
cttgagttagaccgacctgtcgatgatgtcactaagatgctgcgtcttaacgaacggatc
agctcagtggatacaccaattggtggtgatggggataaggcgctgctggatattttgcca
gactctcacaatgccgatcctgagttttcgactcaagatgatgacattcgtgaatcgctg
ctcaactggttggatgaactcaatccaaagcaaaaagaagtgcttgctcgtcgctttggg
ctgctgggttatgagccgtctactttggaagaagtgggtcgtgagatcaatctcactcgt
gagcgagtacgccaaatccaagtggaaggcttacgtcgtctgcgtgagattctggtgaaa
caaggtttgaatatggaagctctgtttaacgttgaatacgatgtcaactaa
DBGET
integrated database retrieval system
