KEGG   Vibrio tarriae: CEQ48_16215
Entry
CEQ48_16215       CDS       T08683                                 
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
vti  Vibrio tarriae
Brite
KEGG Orthology (KO) [BR:vti00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:vti03016]
    CEQ48_16215
Enzymes [BR:vti01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     CEQ48_16215
Transfer RNA biogenesis [BR:vti03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    CEQ48_16215
 Prokaryotic type
    CEQ48_16215
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: ASK56241
UniProt: A0AAU8WWW2
LinkDB
Position
1:complement(2296539..2297624)
AA seq 361 aa
MTDILSPLAYLCGKPTAKAKLKALPEHFQVNEVLGYSLTGSGEHLMVRIRKTGENTSFVA
NELAKACGVPSRAVSWAGLKDRHAVTEQWLSVHLPNGETPDFSAFLAQYPSIEILEVTRH
DKKLRPGDLQGNEFVVTLSKVSDVPAVLSRLETVAELGVPNYFGSQRFGRHGNNLSEARR
WGRDNVRSRNQNQRSLYLSAARSWIFNQIVSKRIEQGCFARFIEGDIALAEQQMFNVAGD
LSAWDQRLQAGEVAISAALAGDNALPTSGQALQLEQAELDAEPDLMALIRGNRMRHDRRA
IALKAQNLSWQVQEDQITLRFSLDAGSFVTSLVRELIEEIPVVRHYDQGHEQESRDSESE
D
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgactgatattctctctcctctggcttatttgtgcggtaaaccgactgcaaaagccaaa
ctcaaagccctaccagagcactttcaagtcaacgaagtgttggggtactccttaactggc
agtggtgaacacttaatggtacgtattcgtaagacaggggagaataccagctttgtagcc
aatgaattagccaaggcttgtggcgtgccttcacgcgcggtgagttgggctgggttgaaa
gatagacacgccgttaccgagcagtggctgagcgtgcatctgccgaatggcgaaacgccg
gacttctctgcgtttctggcacaataccctagcattgaaattctagaggtgactcgccac
gacaaaaagttgcgtccgggcgatttgcaaggcaatgaatttgtcgtcactttatcgaaa
gtcagcgatgttccagccgtattaagccgtttagaaacggtcgctgaactgggcgtaccc
aattactttggtagccagcgttttggacgtcatggcaataacctcagtgaagcgcgccgt
tgggggcgtgataatgtccgttcgcgcaatcagaatcagcgcagcttatatctgtctgca
gctcgttcgtggattttcaaccagattgtctcaaagcgaattgaacagggctgttttgct
cgctttatcgaaggtgacattgctttagcagaacagcaaatgttcaacgtggcaggtgat
ctatccgcttgggatcagcgtttgcaagctggagaagttgcgatttcagcggctttggcg
ggtgataatgccttgccgacttcgggtcaagccttgcaactggaacaagctgaattggat
gcagagcccgatttaatggcgctgatccggggtaatcgtatgcgccatgatcgccgtgcg
atcgccttaaaagcgcaaaacttaagctggcaagtgcaagaggatcaaatcactctgcgt
ttctcattggatgcgggtagctttgtgacttccttagtgcgtgaattgatcgaagagatc
ccagtggtgcgtcattacgatcaaggccatgaacaagagagccgcgattcagagagcgaa
gattaa

DBGET integrated database retrieval system