Vibrio tarriae: CEQ48_17605
Help
Entry
CEQ48_17605 CDS
T08683
Name
(GenBank) Fis family transcriptional regulator
KO
K03557
Fis family transcriptional regulator, factor for inversion stimulation protein
Organism
vti
Vibrio tarriae
Pathway
vti05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vti00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
CEQ48_17605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vti03000
]
CEQ48_17605
03036 Chromosome and associated proteins [BR:
vti03036
]
CEQ48_17605
03400 DNA repair and recombination proteins [BR:
vti03400
]
CEQ48_17605
Transcription factors [BR:
vti03000
]
Prokaryotic type
Helix-turn-helix
Other families
CEQ48_17605
Chromosome and associated proteins [BR:
vti03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
CEQ48_17605
DNA repair and recombination proteins [BR:
vti03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
CEQ48_17605
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fis_N
HTH_8
HTH_30
Xre-like-HTH
HetZ
Baseplate_J_C
DUF134
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ASK56470
UniProt:
A0AAU8WX45
LinkDB
All DBs
Position
1:2583964..2584260
Genome browser
AA seq
98 aa
AA seq
DB search
MFEQNLTSEALTVTTVTSQDQITQKPLRDSVKASLKNYLAQLNGQEVTELYELVLAEVEQ
PLLDTIMQYTRGNQTRAATMMGINRGTLRKKLKKYGMN
NT seq
297 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaacaaaatctgacttcagaagctttaaccgttactaccgtaacttcacaagac
caaatcacgcaaaagccactgcgtgactctgttaaagcgtctcttaaaaattacttggct
caactgaacggccaagaagtgactgaactgtatgaattagttctagctgaagttgaacaa
ccacttctggacaccatcatgcaatacactcgcggtaaccaaactcgcgcagcaaccatg
atgggtatcaaccgcggcactcttcgtaagaaactgaaaaaatacggcatgaactaa
DBGET
integrated database retrieval system
